Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.78□□□□□ -0.36
CCL13Q99616 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 AL157414.3-201ENST00000624276 1954 ntBASIC12.78□□□□□ -0.36
CCL13Q99616 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL13Q99616 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CCL13Q99616 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL13Q99616 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CCL13Q99616 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL13Q99616 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.77□□□□□ -0.36
CCL13Q99616 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL13Q99616 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL13Q99616 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL13Q99616 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL13Q99616 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL13Q99616 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CCL13Q99616 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.77□□□□□ -0.36
CCL13Q99616 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.77□□□□□ -0.36
CCL13Q99616 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL13Q99616 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL13Q99616 TCAF2P1-201ENST00000291129 2421 ntBASIC12.77□□□□□ -0.37
CCL13Q99616 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL13Q99616 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL13Q99616 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCL13Q99616 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL13Q99616 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL13Q99616 RNU1-114P-201ENST00000365297 166 ntBASIC12.77□□□□□ -0.37
CCL13Q99616 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL13Q99616 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
CCL13Q99616 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.77□□□□□ -0.37
CCL13Q99616 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL13Q99616 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL13Q99616 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL13Q99616 TTTY23B-201ENST00000442790 549 ntBASIC12.77□□□□□ -0.37
CCL13Q99616 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.77□□□□□ -0.37
CCL13Q99616 AC007389.4-201ENST00000454674 793 ntBASIC12.77□□□□□ -0.37
CCL13Q99616 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.77□□□□□ -0.37
CCL13Q99616 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.77□□□□□ -0.37
CCL13Q99616 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL13Q99616 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL13Q99616 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CCL13Q99616 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL13Q99616 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CCL13Q99616 REXO1L2P-201ENST00000425429 2069 ntBASIC12.77□□□□□ -0.37
CCL13Q99616 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCL13Q99616 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
CCL13Q99616 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL13Q99616 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL13Q99616 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CCL13Q99616 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL13Q99616 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL13Q99616 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL13Q99616 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCL13Q99616 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CCL13Q99616 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.77□□□□□ -0.37
CCL13Q99616 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL13Q99616 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL13Q99616 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL13Q99616 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CCL13Q99616 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL13Q99616 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL13Q99616 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
CCL13Q99616 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CCL13Q99616 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL13Q99616 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CCL13Q99616 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL13Q99616 AGAP7P-201ENST00000582299 2062 ntBASIC12.76□□□□□ -0.37
CCL13Q99616 AGAP14-201ENST00000624701 2060 ntBASIC12.76□□□□□ -0.37
CCL13Q99616 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CCL13Q99616 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL13Q99616 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL13Q99616 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL13Q99616 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL13Q99616 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL13Q99616 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
CCL13Q99616 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
CCL13Q99616 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL13Q99616 AL645937.2-201ENST00000396808 931 ntBASIC12.76□□□□□ -0.37
CCL13Q99616 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.76□□□□□ -0.37
CCL13Q99616 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.76□□□□□ -0.37
CCL13Q99616 ACTG1P3-201ENST00000431775 1114 ntBASIC12.76□□□□□ -0.37
CCL13Q99616 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.76□□□□□ -0.37
CCL13Q99616 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CCL13Q99616 KRT18P25-201ENST00000508931 1278 ntBASIC12.76□□□□□ -0.37
CCL13Q99616 PTP4A1P2-201ENST00000546033 454 ntBASIC12.76□□□□□ -0.37
CCL13Q99616 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.76□□□□□ -0.37
CCL13Q99616 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.76□□□□□ -0.37
CCL13Q99616 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL13Q99616 AP005019.2-201ENST00000615104 511 ntBASIC12.76□□□□□ -0.37
CCL13Q99616 IGHV3-72-202ENST00000621503 303 ntBASIC12.76□□□□□ -0.37
CCL13Q99616 RPSAP52-203ENST00000622976 1023 ntBASIC12.76□□□□□ -0.37
CCL13Q99616 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.76□□□□□ -0.37
CCL13Q99616 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms