Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDK5RAP2Q96SN8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDK5RAP2Q96SN8 AC011270.2-201ENST00000624293 2550 ntBASIC17.52■□□□□ 0.4
CDK5RAP2Q96SN8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDK5RAP2Q96SN8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CDK5RAP2Q96SN8 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDK5RAP2Q96SN8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.52■□□□□ 0.4
CDK5RAP2Q96SN8 AC092135.3-201ENST00000624151 1846 ntBASIC17.52■□□□□ 0.4
CDK5RAP2Q96SN8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CDK5RAP2Q96SN8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CDK5RAP2Q96SN8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.52■□□□□ 0.4
CDK5RAP2Q96SN8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDK5RAP2Q96SN8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 AC024681.1-201ENST00000521917 487 ntBASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 AC134698.3-201ENST00000523880 214 ntBASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 AL133499.1-201ENST00000596207 608 ntBASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 AC008825.2-201ENST00000603374 718 ntBASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 AL022334.2-201ENST00000610000 484 ntBASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 AC004923.1-202ENST00000642106 209 ntBASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 AC023157.3-201ENST00000619086 2088 ntBASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDK5RAP2Q96SN8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 AC092384.3-202ENST00000564646 2873 ntBASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CDK5RAP2Q96SN8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 TUBB8P8-201ENST00000458717 1058 ntBASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 AC100827.2-201ENST00000563214 1194 ntBASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 LINC01165-201ENST00000445190 1623 ntBASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms