Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 AC009093.2-202ENST00000620513 2079 ntBASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 AC004945.1-201ENST00000416738 983 ntBASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 IGHJ2P-201ENST00000454480 60 ntBASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC85AQ96PX6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 FKBP4P6-201ENST00000457486 1332 ntBASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 AC084346.2-201ENST00000607097 949 ntBASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 AC244157.2-201ENST00000616239 1006 ntBASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC85AQ96PX6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 AC079178.1-201ENST00000420915 656 ntBASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 CHMP1AP1-201ENST00000445563 662 ntBASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 ARTN-209ENST00000479128 471 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 FTLP10-202ENST00000505798 471 ntBASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 AC068587.6-202ENST00000641839 5619 ntBASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 AC112693.3-201ENST00000624819 1983 ntBASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC85AQ96PX6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms