Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 AC007686.3-201ENST00000619017 3487 ntBASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 MTHFR-210ENST00000641407 2387 ntBASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 ACKR1-201ENST00000368121 1240 ntBASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 AC138761.1-201ENST00000584393 385 ntBASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG4P5Q96PW8 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 AC022616.1-201ENST00000518688 554 ntBASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.66■□□□□ 0.1
CSPG4P5Q96PW8 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms