Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TM9SF4Q92544 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TM9SF4Q92544 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.44□□□□□ -0.1
TM9SF4Q92544 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.44□□□□□ -0.1
TM9SF4Q92544 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.44□□□□□ -0.1
TM9SF4Q92544 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.44□□□□□ -0.1
TM9SF4Q92544 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 CICP23-201ENST00000605013 2741 ntBASIC14.44□□□□□ -0.1
TM9SF4Q92544 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 AC126755.1-201ENST00000525846 6405 ntBASIC14.44□□□□□ -0.1
TM9SF4Q92544 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 ANKRD19P-201ENST00000338192 862 ntBASIC14.44□□□□□ -0.1
TM9SF4Q92544 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TM9SF4Q92544 C2orf27AP3-201ENST00000434123 579 ntBASIC14.44□□□□□ -0.1
TM9SF4Q92544 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 YBX1P6-201ENST00000442962 1002 ntBASIC14.44□□□□□ -0.1
TM9SF4Q92544 VDAC1P7-201ENST00000462417 847 ntBASIC14.44□□□□□ -0.1
TM9SF4Q92544 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.44□□□□□ -0.1
TM9SF4Q92544 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.44□□□□□ -0.1
TM9SF4Q92544 AP001889.1-201ENST00000525414 633 ntBASIC14.44□□□□□ -0.1
TM9SF4Q92544 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.44□□□□□ -0.1
TM9SF4Q92544 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.44□□□□□ -0.1
TM9SF4Q92544 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.44□□□□□ -0.1
TM9SF4Q92544 AL354718.3-201ENST00000616414 581 ntBASIC14.44□□□□□ -0.1
TM9SF4Q92544 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 CR382287.1-201ENST00000623954 586 ntBASIC14.44□□□□□ -0.1
TM9SF4Q92544 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.44□□□□□ -0.1
TM9SF4Q92544 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
TM9SF4Q92544 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.44□□□□□ -0.1
TM9SF4Q92544 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TM9SF4Q92544 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.44□□□□□ -0.1
TM9SF4Q92544 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.44□□□□□ -0.1
TM9SF4Q92544 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
TM9SF4Q92544 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.44□□□□□ -0.1
TM9SF4Q92544 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM9SF4Q92544 AC112693.3-201ENST00000624819 1983 ntBASIC14.43□□□□□ -0.1
TM9SF4Q92544 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TM9SF4Q92544 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TM9SF4Q92544 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TM9SF4Q92544 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TM9SF4Q92544 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TM9SF4Q92544 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TM9SF4Q92544 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TM9SF4Q92544 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TM9SF4Q92544 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TM9SF4Q92544 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TM9SF4Q92544 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TM9SF4Q92544 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TM9SF4Q92544 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 AC016694.1-201ENST00000434179 700 ntBASIC14.43□□□□□ -0.1
TM9SF4Q92544 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TM9SF4Q92544 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TM9SF4Q92544 PFN1P12-201ENST00000455938 534 ntBASIC14.43□□□□□ -0.1
TM9SF4Q92544 AC007551.1-201ENST00000457394 519 ntBASIC14.43□□□□□ -0.1
TM9SF4Q92544 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TM9SF4Q92544 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TM9SF4Q92544 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 RPSAP52-203ENST00000622976 1023 ntBASIC14.43□□□□□ -0.1
TM9SF4Q92544 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TM9SF4Q92544 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms