Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNED1Q8TER0 RN7SL725P-201ENST00000606439 259 ntBASIC18.15■□□□□ 0.5
SNED1Q8TER0 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SNED1Q8TER0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNED1Q8TER0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNED1Q8TER0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.15■□□□□ 0.5
SNED1Q8TER0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.15■□□□□ 0.5
SNED1Q8TER0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNED1Q8TER0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNED1Q8TER0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.15■□□□□ 0.5
SNED1Q8TER0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.15■□□□□ 0.5
SNED1Q8TER0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNED1Q8TER0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SNED1Q8TER0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNED1Q8TER0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.15■□□□□ 0.5
SNED1Q8TER0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SNED1Q8TER0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNED1Q8TER0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNED1Q8TER0 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNED1Q8TER0 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNED1Q8TER0 AC026320.2-201ENST00000434379 478 ntBASIC18.15■□□□□ 0.5
SNED1Q8TER0 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.15■□□□□ 0.5
SNED1Q8TER0 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNED1Q8TER0 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SNED1Q8TER0 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNED1Q8TER0 AC005618.3-201ENST00000624928 458 ntBASIC18.15■□□□□ 0.5
SNED1Q8TER0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SNED1Q8TER0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
SNED1Q8TER0 AC015909.3-201ENST00000572855 1794 ntBASIC18.14■□□□□ 0.5
SNED1Q8TER0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNED1Q8TER0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SNED1Q8TER0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNED1Q8TER0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNED1Q8TER0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNED1Q8TER0 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNED1Q8TER0 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC18.14■□□□□ 0.49
SNED1Q8TER0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
SNED1Q8TER0 AC025271.4-201ENST00000621477 1726 ntBASIC18.14■□□□□ 0.49
SNED1Q8TER0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNED1Q8TER0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNED1Q8TER0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.14■□□□□ 0.49
SNED1Q8TER0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
SNED1Q8TER0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNED1Q8TER0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.14■□□□□ 0.49
SNED1Q8TER0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.14■□□□□ 0.49
SNED1Q8TER0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNED1Q8TER0 AC012508.2-201ENST00000567613 1472 ntBASIC18.14■□□□□ 0.49
SNED1Q8TER0 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.14■□□□□ 0.49
SNED1Q8TER0 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNED1Q8TER0 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC18.14■□□□□ 0.49
SNED1Q8TER0 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC18.14■□□□□ 0.49
SNED1Q8TER0 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC18.14■□□□□ 0.49
SNED1Q8TER0 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC18.14■□□□□ 0.49
SNED1Q8TER0 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNED1Q8TER0 RBM8B-201ENST00000555532 525 ntBASIC18.14■□□□□ 0.49
SNED1Q8TER0 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC18.14■□□□□ 0.49
SNED1Q8TER0 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
SNED1Q8TER0 AC133540.1-201ENST00000620845 1019 ntBASIC18.14■□□□□ 0.49
SNED1Q8TER0 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SNED1Q8TER0 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC18.14■□□□□ 0.49
SNED1Q8TER0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SNED1Q8TER0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNED1Q8TER0 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNED1Q8TER0 AC018629.1-201ENST00000623381 1736 ntBASIC18.13■□□□□ 0.49
SNED1Q8TER0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNED1Q8TER0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNED1Q8TER0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNED1Q8TER0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNED1Q8TER0 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNED1Q8TER0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNED1Q8TER0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNED1Q8TER0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNED1Q8TER0 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNED1Q8TER0 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNED1Q8TER0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNED1Q8TER0 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 AP000358.1-201ENST00000456260 156 ntBASIC18.13■□□□□ 0.49
SNED1Q8TER0 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 AC105137.3-201ENST00000617588 984 ntBASIC18.13■□□□□ 0.49
SNED1Q8TER0 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 PRAL-201ENST00000624952 3286 ntBASIC18.13■□□□□ 0.49
SNED1Q8TER0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNED1Q8TER0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNED1Q8TER0 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SNED1Q8TER0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNED1Q8TER0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNED1Q8TER0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms