Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 TTTY23B-201ENST00000442790 549 ntBASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 AC120045.2-201ENST00000567334 178 ntBASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 AC005912.2-201ENST00000619492 2400 ntBASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 AC018442.1-201ENST00000421439 2061 ntBASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 HLA-K-203ENST00000430151 1046 ntBASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 AC124283.3-201ENST00000570869 594 ntBASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 AC010319.3-201ENST00000597028 470 ntBASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 AC107373.2-201ENST00000607735 490 ntBASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 AC018529.2-202ENST00000611482 3087 ntBASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMARCC2Q8TAQ2 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 MTHFR-210ENST00000641407 2387 ntBASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 AC007389.4-201ENST00000454674 793 ntBASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.8■□□□□ 0.44
SMARCC2Q8TAQ2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms