Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 AC145423.3-201ENST00000615987 467 ntBASIC16.21■□□□□ 0.19
LMO3Q8TAP4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.18
LMO3Q8TAP4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.21■□□□□ 0.18
LMO3Q8TAP4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
LMO3Q8TAP4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LMO3Q8TAP4 AC005089.1-201ENST00000619486 2241 ntBASIC16.21■□□□□ 0.18
LMO3Q8TAP4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 AC134312.5-201ENST00000568031 1313 ntBASIC16.2■□□□□ 0.18
LMO3Q8TAP4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 BX640514.1-201ENST00000583223 1918 ntBASIC16.2■□□□□ 0.18
LMO3Q8TAP4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 AC098614.1-201ENST00000368528 745 ntBASIC16.2■□□□□ 0.18
LMO3Q8TAP4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 AP006294.1-201ENST00000415407 339 ntBASIC16.2■□□□□ 0.18
LMO3Q8TAP4 POM121L8P-201ENST00000417732 1281 ntBASIC16.2■□□□□ 0.18
LMO3Q8TAP4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 POM121L9P-203ENST00000441984 1285 ntBASIC16.2■□□□□ 0.18
LMO3Q8TAP4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 AP005018.1-201ENST00000525475 301 ntBASIC16.2■□□□□ 0.18
LMO3Q8TAP4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 GNRHR2-203ENST00000581100 1187 ntBASIC16.2■□□□□ 0.18
LMO3Q8TAP4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.2■□□□□ 0.18
LMO3Q8TAP4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO3Q8TAP4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 SNX18-202ENST00000343017 3140 ntBASIC16.19■□□□□ 0.18
LMO3Q8TAP4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 RN7SKP230-201ENST00000365642 335 ntBASIC16.19■□□□□ 0.18
LMO3Q8TAP4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 FO681548.1-201ENST00000455617 1132 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms