Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 AC136759.1-202ENST00000530858 2194 ntBASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 AC241585.1-201ENST00000433527 519 ntBASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 HIST3H2BA-201ENST00000436555 524 ntBASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 AL512638.1-201ENST00000457493 794 ntBASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 AC005498.2-205ENST00000593218 784 ntBASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 AC079781.5-202ENST00000641784 3743 ntBASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP61Q8NHU2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 EEF1DP4-201ENST00000446006 880 ntBASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 AL512361.1-201ENST00000554200 418 ntBASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 MIR4313-201ENST00000580760 101 ntBASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 AL390955.2-201ENST00000603032 514 ntBASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP61Q8NHU2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP61Q8NHU2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP61Q8NHU2 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP61Q8NHU2 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP61Q8NHU2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP61Q8NHU2 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
CFAP61Q8NHU2 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.52■□□□□ 0.08
CFAP61Q8NHU2 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP61Q8NHU2 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.52■□□□□ 0.08
CFAP61Q8NHU2 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms