Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
C3orf56Q8N813 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC11.96□□□□□ -0.49
C3orf56Q8N813 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
C3orf56Q8N813 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
C3orf56Q8N813 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC11.96□□□□□ -0.49
C3orf56Q8N813 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC11.96□□□□□ -0.49
C3orf56Q8N813 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
C3orf56Q8N813 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC11.96□□□□□ -0.49
C3orf56Q8N813 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC11.96□□□□□ -0.49
C3orf56Q8N813 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
C3orf56Q8N813 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 ACTG1P2-201ENST00000415776 1125 ntBASIC11.96□□□□□ -0.49
C3orf56Q8N813 ACTG1P11-201ENST00000425411 1125 ntBASIC11.96□□□□□ -0.49
C3orf56Q8N813 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.96□□□□□ -0.49
C3orf56Q8N813 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC11.96□□□□□ -0.49
C3orf56Q8N813 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
C3orf56Q8N813 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC11.96□□□□□ -0.49
C3orf56Q8N813 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC11.96□□□□□ -0.49
C3orf56Q8N813 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC11.96□□□□□ -0.49
C3orf56Q8N813 AC025181.2-201ENST00000606994 802 ntBASIC11.96□□□□□ -0.49
C3orf56Q8N813 AP001002.3-201ENST00000623482 206 ntBASIC11.96□□□□□ -0.49
C3orf56Q8N813 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
C3orf56Q8N813 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
C3orf56Q8N813 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
C3orf56Q8N813 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
C3orf56Q8N813 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
C3orf56Q8N813 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC11.96□□□□□ -0.5
C3orf56Q8N813 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
C3orf56Q8N813 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
C3orf56Q8N813 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
C3orf56Q8N813 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
C3orf56Q8N813 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
C3orf56Q8N813 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
C3orf56Q8N813 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
C3orf56Q8N813 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
C3orf56Q8N813 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 AL157791.1-201ENST00000553667 1699 ntBASIC11.95□□□□□ -0.5
C3orf56Q8N813 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 FGFR3P1-201ENST00000449999 601 ntBASIC11.95□□□□□ -0.5
C3orf56Q8N813 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 GAPDHP40-201ENST00000505218 1006 ntBASIC11.95□□□□□ -0.5
C3orf56Q8N813 AC090857.1-201ENST00000527400 390 ntBASIC11.95□□□□□ -0.5
C3orf56Q8N813 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 AC012044.1-201ENST00000603431 297 ntBASIC11.95□□□□□ -0.5
C3orf56Q8N813 AC097359.3-201ENST00000603982 1210 ntBASIC11.95□□□□□ -0.5
C3orf56Q8N813 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 AC018635.2-201ENST00000608625 364 ntBASIC11.95□□□□□ -0.5
C3orf56Q8N813 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
C3orf56Q8N813 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC11.95□□□□□ -0.5
C3orf56Q8N813 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms