Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 AL645939.5-201ENST00000606834 243 ntBASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 AC022748.3-201ENST00000621828 275 ntBASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 FLJ16779-201ENST00000612722 7638 ntBASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SYNPOQ8N3V7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 HYMAI-201ENST00000635591 3347 ntBASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 RPL5P21-201ENST00000404620 815 ntBASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 FTLP1-201ENST00000449155 526 ntBASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 RPS2P36-201ENST00000456516 831 ntBASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 RN7SL11P-201ENST00000471305 293 ntBASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 MESTP3-201ENST00000503460 968 ntBASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 AP003171.2-201ENST00000528208 925 ntBASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 AC005730.2-201ENST00000564549 1184 ntBASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 MIR4706-201ENST00000582134 82 ntBASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 RN7SL163P-201ENST00000583100 276 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms