Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 AC124283.3-201ENST00000570869 594 ntBASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 SPDYE22P-201ENST00000582158 798 ntBASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 BX539320.1-201ENST00000623759 877 ntBASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 NUS1P3-201ENST00000423502 862 ntBASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 SERBP1P5-201ENST00000510079 1181 ntBASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 AC009118.2-201ENST00000613275 655 ntBASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 AC007431.3-201ENST00000623221 587 ntBASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.77■□□□□ 0.6
CHD1LQ86WJ1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CHD1LQ86WJ1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHD1LQ86WJ1 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHD1LQ86WJ1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CHD1LQ86WJ1 AC063926.3-201ENST00000624734 5658 ntBASIC18.77■□□□□ 0.59
CHD1LQ86WJ1 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHD1LQ86WJ1 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHD1LQ86WJ1 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
CHD1LQ86WJ1 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 KRT8P22-201ENST00000562317 1415 ntBASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 C1QBPP1-201ENST00000400117 770 ntBASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 AL139094.1-201ENST00000405549 1188 ntBASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 AL442647.2-201ENST00000429864 857 ntBASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 AC092552.1-201ENST00000547243 906 ntBASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 AL359711.2-201ENST00000563105 872 ntBASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 DUX4L47-201ENST00000566374 394 ntBASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 AC093726.1-201ENST00000608064 963 ntBASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD1LQ86WJ1 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms