Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 AP001282.1-201ENST00000531301 1499 ntBASIC13.42□□□□□ -0.26
C11orf88Q6PI97 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 RN7SL589P-201ENST00000481268 310 ntBASIC13.41□□□□□ -0.26
C11orf88Q6PI97 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 RFPL4AP1-201ENST00000530883 850 ntBASIC13.41□□□□□ -0.26
C11orf88Q6PI97 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 AL031432.2-201ENST00000566714 459 ntBASIC13.41□□□□□ -0.26
C11orf88Q6PI97 AL928711.1-201ENST00000570165 459 ntBASIC13.41□□□□□ -0.26
C11orf88Q6PI97 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 AL513210.1-201ENST00000629608 234 ntBASIC13.41□□□□□ -0.26
C11orf88Q6PI97 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 BEND3P1-201ENST00000421591 1944 ntBASIC13.41□□□□□ -0.26
C11orf88Q6PI97 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
C11orf88Q6PI97 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 TSEN15P1-201ENST00000423257 515 ntBASIC13.4□□□□□ -0.26
C11orf88Q6PI97 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 HMGN1P19-201ENST00000436976 333 ntBASIC13.4□□□□□ -0.26
C11orf88Q6PI97 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 CYMP-203ENST00000474680 1263 ntBASIC13.4□□□□□ -0.26
C11orf88Q6PI97 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms