Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF43Q68DV7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF43Q68DV7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF43Q68DV7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF43Q68DV7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.02■□□□□ 0.15
RNF43Q68DV7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF43Q68DV7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RNF43Q68DV7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.02■□□□□ 0.15
RNF43Q68DV7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.02■□□□□ 0.15
RNF43Q68DV7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RNF43Q68DV7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
RNF43Q68DV7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF43Q68DV7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF43Q68DV7 C18orf15-201ENST00000623680 2534 ntBASIC16.02■□□□□ 0.15
RNF43Q68DV7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF43Q68DV7 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
RNF43Q68DV7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.02■□□□□ 0.15
RNF43Q68DV7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.02■□□□□ 0.15
RNF43Q68DV7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF43Q68DV7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RNF43Q68DV7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.02■□□□□ 0.15
RNF43Q68DV7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF43Q68DV7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF43Q68DV7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF43Q68DV7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RNF43Q68DV7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF43Q68DV7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
RNF43Q68DV7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 MIR1908-201ENST00000410394 80 ntBASIC16.01■□□□□ 0.15
RNF43Q68DV7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 AC134915.1-201ENST00000426461 574 ntBASIC16.01■□□□□ 0.15
RNF43Q68DV7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 VDAC1P7-201ENST00000462417 847 ntBASIC16.01■□□□□ 0.15
RNF43Q68DV7 USP32P1-208ENST00000506594 1164 ntBASIC16.01■□□□□ 0.15
RNF43Q68DV7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 BTNL10-201ENST00000595971 695 ntBASIC16.01■□□□□ 0.15
RNF43Q68DV7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 AC133539.2-201ENST00000604757 467 ntBASIC16.01■□□□□ 0.15
RNF43Q68DV7 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 KRT8P22-201ENST00000562317 1415 ntBASIC16.01■□□□□ 0.15
RNF43Q68DV7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RNF43Q68DV7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF43Q68DV7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RNF43Q68DV7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF43Q68DV7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF43Q68DV7 AC020907.1-201ENST00000616460 1350 ntBASIC16■□□□□ 0.15
RNF43Q68DV7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF43Q68DV7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16■□□□□ 0.15
RNF43Q68DV7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16■□□□□ 0.15
RNF43Q68DV7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
RNF43Q68DV7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF43Q68DV7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF43Q68DV7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF43Q68DV7 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RNF43Q68DV7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF43Q68DV7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16■□□□□ 0.15
RNF43Q68DV7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF43Q68DV7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RNF43Q68DV7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms