Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 KRT8P22-201ENST00000562317 1415 ntBASIC14.41□□□□□ -0.1
LPCAT4Q643R3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 AL354702.1-201ENST00000442006 1960 ntBASIC14.4□□□□□ -0.1
LPCAT4Q643R3 AC068760.1-201ENST00000493579 1953 ntBASIC14.4□□□□□ -0.1
LPCAT4Q643R3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 AC073548.1-201ENST00000624088 1882 ntBASIC14.4□□□□□ -0.1
LPCAT4Q643R3 INE2-201ENST00000630399 1874 ntBASIC14.4□□□□□ -0.1
LPCAT4Q643R3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 AC004899.2-201ENST00000622993 3860 ntBASIC14.4□□□□□ -0.1
LPCAT4Q643R3 CYP4F24P-201ENST00000586049 1580 ntBASIC14.4□□□□□ -0.1
LPCAT4Q643R3 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 AC012508.2-201ENST00000567613 1472 ntBASIC14.4□□□□□ -0.1
LPCAT4Q643R3 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LPCAT4Q643R3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms