Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00242Q5T6M2 ZNF259P1-201ENST00000407656 1365 ntBASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 KRT8P12-202ENST00000472924 1397 ntBASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00242Q5T6M2 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 LILRP1-201ENST00000444199 1370 ntBASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 AC074338.1-201ENST00000416825 156 ntBASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 AC018529.1-201ENST00000613063 361 ntBASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 AC079781.5-202ENST00000641784 3743 ntBASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms