Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.64■□□□□ 0.57
ATP2B3Q16720 POM121L9P-203ENST00000441984 1285 ntBASIC18.64■□□□□ 0.57
ATP2B3Q16720 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.64■□□□□ 0.57
ATP2B3Q16720 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP2B3Q16720 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2B3Q16720 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.64■□□□□ 0.57
ATP2B3Q16720 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
ATP2B3Q16720 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2B3Q16720 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATP2B3Q16720 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ATP2B3Q16720 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ATP2B3Q16720 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2B3Q16720 SNX18-202ENST00000343017 3140 ntBASIC18.64■□□□□ 0.57
ATP2B3Q16720 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP2B3Q16720 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.64■□□□□ 0.57
ATP2B3Q16720 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2B3Q16720 AL354989.2-201ENST00000435838 1540 ntBASIC18.64■□□□□ 0.57
ATP2B3Q16720 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP2B3Q16720 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP2B3Q16720 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP2B3Q16720 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP2B3Q16720 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 FAM86MP-201ENST00000340703 885 ntBASIC18.63■□□□□ 0.57
ATP2B3Q16720 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ATP2B3Q16720 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.63■□□□□ 0.57
ATP2B3Q16720 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP2B3Q16720 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ATP2B3Q16720 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.63■□□□□ 0.57
ATP2B3Q16720 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP2B3Q16720 AC004466.1-201ENST00000599515 1080 ntBASIC18.63■□□□□ 0.57
ATP2B3Q16720 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ATP2B3Q16720 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP2B3Q16720 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 AC126365.1-201ENST00000578585 1514 ntBASIC18.63■□□□□ 0.57
ATP2B3Q16720 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ATP2B3Q16720 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B3Q16720 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2B3Q16720 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2B3Q16720 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2B3Q16720 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ATP2B3Q16720 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP2B3Q16720 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2B3Q16720 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2B3Q16720 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2B3Q16720 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2B3Q16720 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2B3Q16720 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.62■□□□□ 0.57
ATP2B3Q16720 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ATP2B3Q16720 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2B3Q16720 RPL13AP20-201ENST00000459725 609 ntBASIC18.62■□□□□ 0.57
ATP2B3Q16720 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATP2B3Q16720 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.62■□□□□ 0.57
ATP2B3Q16720 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2B3Q16720 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.62■□□□□ 0.57
ATP2B3Q16720 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATP2B3Q16720 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.62■□□□□ 0.57
ATP2B3Q16720 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ATP2B3Q16720 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP2B3Q16720 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2B3Q16720 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2B3Q16720 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2B3Q16720 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP2B3Q16720 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.62■□□□□ 0.57
ATP2B3Q16720 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2B3Q16720 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2B3Q16720 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC18.62■□□□□ 0.57
ATP2B3Q16720 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATP2B3Q16720 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
ATP2B3Q16720 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP2B3Q16720 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2B3Q16720 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2B3Q16720 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2B3Q16720 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2B3Q16720 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms