Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SEC61A1P61619 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
SEC61A1P61619 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SEC61A1P61619 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.44□□□□□ -0.26
SEC61A1P61619 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 AC092127.1-201ENST00000567093 3455 ntBASIC13.44□□□□□ -0.26
SEC61A1P61619 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.44□□□□□ -0.26
SEC61A1P61619 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.44□□□□□ -0.26
SEC61A1P61619 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.44□□□□□ -0.26
SEC61A1P61619 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.44□□□□□ -0.26
SEC61A1P61619 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.44□□□□□ -0.26
SEC61A1P61619 AC002472.2-201ENST00000442739 958 ntBASIC13.44□□□□□ -0.26
SEC61A1P61619 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.44□□□□□ -0.26
SEC61A1P61619 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.44□□□□□ -0.26
SEC61A1P61619 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.44□□□□□ -0.26
SEC61A1P61619 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.44□□□□□ -0.26
SEC61A1P61619 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.44□□□□□ -0.26
SEC61A1P61619 AC138761.1-201ENST00000584393 385 ntBASIC13.44□□□□□ -0.26
SEC61A1P61619 MIR4321-201ENST00000592276 80 ntBASIC13.44□□□□□ -0.26
SEC61A1P61619 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
SEC61A1P61619 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.44□□□□□ -0.26
SEC61A1P61619 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.44□□□□□ -0.26
SEC61A1P61619 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
SEC61A1P61619 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
SEC61A1P61619 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.44□□□□□ -0.26
SEC61A1P61619 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.44□□□□□ -0.26
SEC61A1P61619 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SEC61A1P61619 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.43□□□□□ -0.26
SEC61A1P61619 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SEC61A1P61619 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.43□□□□□ -0.26
SEC61A1P61619 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.43□□□□□ -0.26
SEC61A1P61619 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
SEC61A1P61619 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 AC134407.2-201ENST00000625089 1978 ntBASIC13.43□□□□□ -0.26
SEC61A1P61619 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
SEC61A1P61619 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
SEC61A1P61619 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.43□□□□□ -0.26
SEC61A1P61619 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SEC61A1P61619 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SEC61A1P61619 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SEC61A1P61619 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SEC61A1P61619 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.43□□□□□ -0.26
SEC61A1P61619 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.43□□□□□ -0.26
SEC61A1P61619 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 AC022144.1-201ENST00000602255 1580 ntBASIC13.43□□□□□ -0.26
SEC61A1P61619 AL844908.2-201ENST00000609461 460 ntBASIC13.43□□□□□ -0.26
SEC61A1P61619 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SEC61A1P61619 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.43□□□□□ -0.26
SEC61A1P61619 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms