Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CXCR4P61073 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
CXCR4P61073 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CXCR4P61073 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCR4P61073 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CXCR4P61073 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCR4P61073 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
CXCR4P61073 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CXCR4P61073 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCR4P61073 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.92□□□□□ -0.18
CXCR4P61073 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CXCR4P61073 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCR4P61073 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCR4P61073 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCR4P61073 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
CXCR4P61073 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CXCR4P61073 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCR4P61073 AL590627.1-203ENST00000421194 1026 ntBASIC13.92□□□□□ -0.18
CXCR4P61073 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.92□□□□□ -0.18
CXCR4P61073 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.92□□□□□ -0.18
CXCR4P61073 ADH5P3-201ENST00000433842 1137 ntBASIC13.92□□□□□ -0.18
CXCR4P61073 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.92□□□□□ -0.18
CXCR4P61073 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CXCR4P61073 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.92□□□□□ -0.18
CXCR4P61073 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.92□□□□□ -0.18
CXCR4P61073 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CXCR4P61073 AC022447.6-201ENST00000515522 438 ntBASIC13.92□□□□□ -0.18
CXCR4P61073 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
CXCR4P61073 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.92□□□□□ -0.18
CXCR4P61073 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.92□□□□□ -0.18
CXCR4P61073 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.92□□□□□ -0.18
CXCR4P61073 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
CXCR4P61073 AC026120.1-201ENST00000611536 926 ntBASIC13.92□□□□□ -0.18
CXCR4P61073 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
CXCR4P61073 INE2-201ENST00000630399 1874 ntBASIC13.92□□□□□ -0.18
CXCR4P61073 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCR4P61073 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.92□□□□□ -0.18
CXCR4P61073 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.92□□□□□ -0.18
CXCR4P61073 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CXCR4P61073 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CXCR4P61073 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CXCR4P61073 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CXCR4P61073 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CXCR4P61073 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.92□□□□□ -0.18
CXCR4P61073 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CXCR4P61073 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCR4P61073 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CXCR4P61073 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.91□□□□□ -0.18
CXCR4P61073 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.91□□□□□ -0.18
CXCR4P61073 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 AL354702.1-201ENST00000442006 1960 ntBASIC13.91□□□□□ -0.18
CXCR4P61073 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.91□□□□□ -0.18
CXCR4P61073 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.91□□□□□ -0.18
CXCR4P61073 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
CXCR4P61073 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CXCR4P61073 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CXCR4P61073 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.91□□□□□ -0.18
CXCR4P61073 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.91□□□□□ -0.18
CXCR4P61073 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.91□□□□□ -0.18
CXCR4P61073 AC079140.1-201ENST00000508039 487 ntBASIC13.91□□□□□ -0.18
CXCR4P61073 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.91□□□□□ -0.18
CXCR4P61073 KRT8P48-201ENST00000515599 1220 ntBASIC13.91□□□□□ -0.18
CXCR4P61073 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CXCR4P61073 KRT8P23-201ENST00000560090 1207 ntBASIC13.91□□□□□ -0.18
CXCR4P61073 LINC01225-203ENST00000563550 1244 ntBASIC13.91□□□□□ -0.18
CXCR4P61073 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.91□□□□□ -0.18
CXCR4P61073 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.91□□□□□ -0.18
CXCR4P61073 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.91□□□□□ -0.18
CXCR4P61073 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 FAM197Y3-203ENST00000618346 717 ntBASIC13.91□□□□□ -0.18
CXCR4P61073 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CXCR4P61073 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.91□□□□□ -0.18
CXCR4P61073 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.91□□□□□ -0.18
CXCR4P61073 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CXCR4P61073 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.91□□□□□ -0.18
CXCR4P61073 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.91□□□□□ -0.18
CXCR4P61073 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CXCR4P61073 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 AP3S2-216ENST00000617003 1561 ntBASIC13.91□□□□□ -0.18
CXCR4P61073 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CXCR4P61073 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CXCR4P61073 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.91□□□□□ -0.18
CXCR4P61073 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
CXCR4P61073 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms