Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CLDN12P56749 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.31□□□□□ -0.28
CLDN12P56749 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CLDN12P56749 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 SPDYE11-202ENST00000450699 704 ntBASIC13.31□□□□□ -0.28
CLDN12P56749 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.31□□□□□ -0.28
CLDN12P56749 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CLDN12P56749 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.31□□□□□ -0.28
CLDN12P56749 KRT8P48-201ENST00000515599 1220 ntBASIC13.31□□□□□ -0.28
CLDN12P56749 FAM86C2P-203ENST00000528684 1004 ntBASIC13.31□□□□□ -0.28
CLDN12P56749 SLC25A39P2-201ENST00000537614 270 ntBASIC13.31□□□□□ -0.28
CLDN12P56749 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 SPDYE9P-201ENST00000570642 692 ntBASIC13.31□□□□□ -0.28
CLDN12P56749 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.31□□□□□ -0.28
CLDN12P56749 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.31□□□□□ -0.28
CLDN12P56749 SPDYE10P-202ENST00000612005 668 ntBASIC13.31□□□□□ -0.28
CLDN12P56749 SPDYE8P-202ENST00000612377 668 ntBASIC13.31□□□□□ -0.28
CLDN12P56749 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.31□□□□□ -0.28
CLDN12P56749 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 HLA-A-201ENST00000376802 1334 ntBASIC13.31□□□□□ -0.28
CLDN12P56749 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CLDN12P56749 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.31□□□□□ -0.28
CLDN12P56749 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN12P56749 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.31□□□□□ -0.28
CLDN12P56749 AL137784.3-201ENST00000623858 2288 ntBASIC13.3□□□□□ -0.28
CLDN12P56749 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
CLDN12P56749 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.3□□□□□ -0.28
CLDN12P56749 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CLDN12P56749 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDN12P56749 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDN12P56749 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CLDN12P56749 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDN12P56749 AC012508.2-201ENST00000567613 1472 ntBASIC13.3□□□□□ -0.28
CLDN12P56749 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDN12P56749 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDN12P56749 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDN12P56749 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDN12P56749 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CLDN12P56749 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CLDN12P56749 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 ADH5P3-201ENST00000433842 1137 ntBASIC13.3□□□□□ -0.28
CLDN12P56749 FAM58CP-201ENST00000435741 640 ntBASIC13.3□□□□□ -0.28
CLDN12P56749 HIST3H2BA-201ENST00000436555 524 ntBASIC13.3□□□□□ -0.28
CLDN12P56749 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.3□□□□□ -0.28
CLDN12P56749 TARDBPP1-201ENST00000442013 1203 ntBASIC13.3□□□□□ -0.28
CLDN12P56749 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.3□□□□□ -0.28
CLDN12P56749 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.3□□□□□ -0.28
CLDN12P56749 AC079140.1-201ENST00000508039 487 ntBASIC13.3□□□□□ -0.28
CLDN12P56749 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.3□□□□□ -0.28
CLDN12P56749 AC092902.6-201ENST00000641783 218 ntBASIC13.3□□□□□ -0.28
CLDN12P56749 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CLDN12P56749 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
CLDN12P56749 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.3□□□□□ -0.28
CLDN12P56749 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
CLDN12P56749 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.3□□□□□ -0.28
CLDN12P56749 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 CICP17-201ENST00000418553 2377 ntBASIC13.3□□□□□ -0.28
CLDN12P56749 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
CLDN12P56749 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDN12P56749 AC015802.1-201ENST00000588104 1449 ntBASIC13.3□□□□□ -0.28
CLDN12P56749 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN12P56749 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN12P56749 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms