Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PER3P56645 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PER3P56645 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.22□□□□□ -0.13
PER3P56645 KRT8P37-201ENST00000451609 1420 ntBASIC14.22□□□□□ -0.13
PER3P56645 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PER3P56645 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.22□□□□□ -0.13
PER3P56645 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PER3P56645 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PER3P56645 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PER3P56645 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
PER3P56645 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PER3P56645 AC093525.8-201ENST00000624099 1342 ntBASIC14.21□□□□□ -0.13
PER3P56645 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PER3P56645 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PER3P56645 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PER3P56645 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.21□□□□□ -0.13
PER3P56645 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PER3P56645 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PER3P56645 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.21□□□□□ -0.13
PER3P56645 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PER3P56645 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PER3P56645 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PER3P56645 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.21□□□□□ -0.13
PER3P56645 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PER3P56645 AC004945.1-201ENST00000416738 983 ntBASIC14.21□□□□□ -0.13
PER3P56645 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.21□□□□□ -0.13
PER3P56645 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PER3P56645 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.21□□□□□ -0.13
PER3P56645 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.21□□□□□ -0.13
PER3P56645 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.21□□□□□ -0.13
PER3P56645 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.21□□□□□ -0.13
PER3P56645 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.21□□□□□ -0.13
PER3P56645 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PER3P56645 AC010328.2-201ENST00000597698 1111 ntBASIC14.21□□□□□ -0.13
PER3P56645 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PER3P56645 LINC00528-201ENST00000600723 2160 ntBASIC14.21□□□□□ -0.13
PER3P56645 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PER3P56645 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PER3P56645 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PER3P56645 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.21□□□□□ -0.14
PER3P56645 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
PER3P56645 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PER3P56645 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
PER3P56645 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
PER3P56645 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.2□□□□□ -0.14
PER3P56645 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
PER3P56645 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.2□□□□□ -0.14
PER3P56645 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PER3P56645 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.2□□□□□ -0.14
PER3P56645 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.2□□□□□ -0.14
PER3P56645 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.2□□□□□ -0.14
PER3P56645 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.2□□□□□ -0.14
PER3P56645 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.2□□□□□ -0.14
PER3P56645 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.2□□□□□ -0.14
PER3P56645 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 SOCS2P1-201ENST00000417727 557 ntBASIC14.2□□□□□ -0.14
PER3P56645 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
PER3P56645 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.2□□□□□ -0.14
PER3P56645 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.2□□□□□ -0.14
PER3P56645 AC068587.3-201ENST00000526613 355 ntBASIC14.2□□□□□ -0.14
PER3P56645 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.2□□□□□ -0.14
PER3P56645 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.2□□□□□ -0.14
PER3P56645 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.2□□□□□ -0.14
PER3P56645 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 AC009486.1-201ENST00000569860 813 ntBASIC14.2□□□□□ -0.14
PER3P56645 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PER3P56645 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.2□□□□□ -0.14
PER3P56645 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.2□□□□□ -0.14
PER3P56645 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PER3P56645 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PER3P56645 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 AC006486.2-201ENST00000624246 2199 ntBASIC14.2□□□□□ -0.14
PER3P56645 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.2□□□□□ -0.14
PER3P56645 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.2□□□□□ -0.14
PER3P56645 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
PER3P56645 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms