Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
ATP1B3P54709 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.3□□□□□ -0.28
ATP1B3P54709 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.29□□□□□ -0.28
ATP1B3P54709 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.29□□□□□ -0.28
ATP1B3P54709 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.29□□□□□ -0.28
ATP1B3P54709 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.29□□□□□ -0.28
ATP1B3P54709 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 AC140479.7-201ENST00000636301 2332 ntBASIC13.29□□□□□ -0.28
ATP1B3P54709 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.29□□□□□ -0.28
ATP1B3P54709 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
ATP1B3P54709 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
ATP1B3P54709 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ATP1B3P54709 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
ATP1B3P54709 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 RPL37AP1-201ENST00000412502 279 ntBASIC13.29□□□□□ -0.28
ATP1B3P54709 AC074338.1-201ENST00000416825 156 ntBASIC13.29□□□□□ -0.28
ATP1B3P54709 AC015922.1-201ENST00000421102 1152 ntBASIC13.29□□□□□ -0.28
ATP1B3P54709 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 FAM8A3P-201ENST00000427218 844 ntBASIC13.29□□□□□ -0.28
ATP1B3P54709 GHSR-202ENST00000427970 912 ntBASIC13.29□□□□□ -0.28
ATP1B3P54709 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.29□□□□□ -0.28
ATP1B3P54709 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 RN7SL618P-201ENST00000477850 296 ntBASIC13.29□□□□□ -0.28
ATP1B3P54709 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.29□□□□□ -0.28
ATP1B3P54709 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.29□□□□□ -0.28
ATP1B3P54709 AL596442.2-201ENST00000610240 980 ntBASIC13.29□□□□□ -0.28
ATP1B3P54709 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.29□□□□□ -0.28
ATP1B3P54709 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.29□□□□□ -0.28
ATP1B3P54709 AC134684.3-201ENST00000641758 218 ntBASIC13.29□□□□□ -0.28
ATP1B3P54709 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.29□□□□□ -0.28
ATP1B3P54709 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.29□□□□□ -0.28
ATP1B3P54709 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ATP1B3P54709 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
ATP1B3P54709 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
ATP1B3P54709 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ATP1B3P54709 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
ATP1B3P54709 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
ATP1B3P54709 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.29□□□□□ -0.28
ATP1B3P54709 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.29□□□□□ -0.28
ATP1B3P54709 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.29□□□□□ -0.28
ATP1B3P54709 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.29□□□□□ -0.28
ATP1B3P54709 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATP1B3P54709 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.28□□□□□ -0.28
ATP1B3P54709 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.28□□□□□ -0.28
ATP1B3P54709 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ATP1B3P54709 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.28□□□□□ -0.28
ATP1B3P54709 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ATP1B3P54709 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.28□□□□□ -0.28
ATP1B3P54709 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.28□□□□□ -0.28
ATP1B3P54709 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
ATP1B3P54709 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.28□□□□□ -0.28
ATP1B3P54709 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.28□□□□□ -0.28
ATP1B3P54709 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
ATP1B3P54709 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ATP1B3P54709 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 CNN2P2-201ENST00000443536 909 ntBASIC13.28□□□□□ -0.28
ATP1B3P54709 CNN2P3-201ENST00000450201 906 ntBASIC13.28□□□□□ -0.28
ATP1B3P54709 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms