Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN3P51790 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CLCN3P51790 MIR663B-201ENST00000408361 115 ntBASIC16.64■□□□□ 0.25
CLCN3P51790 CHMP1AP1-201ENST00000445563 662 ntBASIC16.64■□□□□ 0.25
CLCN3P51790 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCN3P51790 MIR4683-201ENST00000579659 81 ntBASIC16.64■□□□□ 0.25
CLCN3P51790 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.64■□□□□ 0.25
CLCN3P51790 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN3P51790 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.64■□□□□ 0.25
CLCN3P51790 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.64■□□□□ 0.25
CLCN3P51790 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CLCN3P51790 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN3P51790 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CLCN3P51790 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLCN3P51790 AL133338.1-201ENST00000565695 1517 ntBASIC16.64■□□□□ 0.25
CLCN3P51790 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCN3P51790 AL162727.3-201ENST00000635661 2787 ntBASIC16.64■□□□□ 0.25
CLCN3P51790 PPT1-215ENST00000641471 2368 ntBASIC16.64■□□□□ 0.25
CLCN3P51790 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLCN3P51790 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN3P51790 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCN3P51790 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN3P51790 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.64■□□□□ 0.25
CLCN3P51790 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN3P51790 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCN3P51790 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 AC009093.2-202ENST00000620513 2079 ntBASIC16.63■□□□□ 0.25
CLCN3P51790 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCN3P51790 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCN3P51790 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCN3P51790 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CLCN3P51790 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCN3P51790 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLCN3P51790 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.63■□□□□ 0.25
CLCN3P51790 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.63■□□□□ 0.25
CLCN3P51790 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.63■□□□□ 0.25
CLCN3P51790 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.63■□□□□ 0.25
CLCN3P51790 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.63■□□□□ 0.25
CLCN3P51790 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCN3P51790 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.63■□□□□ 0.25
CLCN3P51790 AC244157.2-201ENST00000616239 1006 ntBASIC16.63■□□□□ 0.25
CLCN3P51790 AP001002.3-201ENST00000623482 206 ntBASIC16.63■□□□□ 0.25
CLCN3P51790 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CLCN3P51790 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCN3P51790 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN3P51790 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN3P51790 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN3P51790 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLCN3P51790 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLCN3P51790 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN3P51790 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.62■□□□□ 0.25
CLCN3P51790 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCN3P51790 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLCN3P51790 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCN3P51790 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN3P51790 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN3P51790 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.62■□□□□ 0.25
CLCN3P51790 AC011840.2-201ENST00000563063 1520 ntBASIC16.62■□□□□ 0.25
CLCN3P51790 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLCN3P51790 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN3P51790 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN3P51790 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CLCN3P51790 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN3P51790 AL136309.1-201ENST00000403917 691 ntBASIC16.62■□□□□ 0.25
CLCN3P51790 AC004945.1-201ENST00000416738 983 ntBASIC16.62■□□□□ 0.25
CLCN3P51790 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.62■□□□□ 0.25
CLCN3P51790 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.62■□□□□ 0.25
CLCN3P51790 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCN3P51790 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.62■□□□□ 0.25
CLCN3P51790 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.62■□□□□ 0.25
CLCN3P51790 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.62■□□□□ 0.25
CLCN3P51790 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CLCN3P51790 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CLCN3P51790 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.62■□□□□ 0.25
CLCN3P51790 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCN3P51790 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN3P51790 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.62■□□□□ 0.25
CLCN3P51790 MROH4P-201ENST00000431302 1578 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms