Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.93□□□□□ -0.18
CENPAP49450 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.93□□□□□ -0.18
CENPAP49450 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.93□□□□□ -0.18
CENPAP49450 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.93□□□□□ -0.18
CENPAP49450 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CENPAP49450 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.93□□□□□ -0.18
CENPAP49450 MIR6069-201ENST00000620069 79 ntBASIC13.93□□□□□ -0.18
CENPAP49450 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CENPAP49450 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CENPAP49450 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CENPAP49450 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CENPAP49450 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.93□□□□□ -0.18
CENPAP49450 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CENPAP49450 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 KRT8P12-202ENST00000472924 1397 ntBASIC13.93□□□□□ -0.18
CENPAP49450 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.93□□□□□ -0.18
CENPAP49450 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 AC013726.1-201ENST00000563747 2285 ntBASIC13.93□□□□□ -0.18
CENPAP49450 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.93□□□□□ -0.18
CENPAP49450 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CENPAP49450 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.93□□□□□ -0.18
CENPAP49450 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.93□□□□□ -0.18
CENPAP49450 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CENPAP49450 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CENPAP49450 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 AC084364.1-201ENST00000551967 1556 ntBASIC13.92□□□□□ -0.18
CENPAP49450 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 AC106881.1-201ENST00000605849 3329 ntBASIC13.92□□□□□ -0.18
CENPAP49450 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.92□□□□□ -0.18
CENPAP49450 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.92□□□□□ -0.18
CENPAP49450 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.92□□□□□ -0.18
CENPAP49450 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.92□□□□□ -0.18
CENPAP49450 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CENPAP49450 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CENPAP49450 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 FAM8A3P-201ENST00000427218 844 ntBASIC13.92□□□□□ -0.18
CENPAP49450 AL079307.3-201ENST00000556114 283 ntBASIC13.92□□□□□ -0.18
CENPAP49450 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.92□□□□□ -0.18
CENPAP49450 AL133215.2-201ENST00000609242 977 ntBASIC13.92□□□□□ -0.18
CENPAP49450 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.92□□□□□ -0.18
CENPAP49450 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CENPAP49450 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.92□□□□□ -0.18
CENPAP49450 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.92□□□□□ -0.18
CENPAP49450 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.92□□□□□ -0.18
CENPAP49450 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.92□□□□□ -0.18
CENPAP49450 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.92□□□□□ -0.18
CENPAP49450 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.92□□□□□ -0.18
CENPAP49450 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
CENPAP49450 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 ZBED1P1-201ENST00000502364 1930 ntBASIC13.92□□□□□ -0.18
CENPAP49450 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.92□□□□□ -0.18
CENPAP49450 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CENPAP49450 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.92□□□□□ -0.18
CENPAP49450 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.92□□□□□ -0.18
CENPAP49450 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.92□□□□□ -0.18
CENPAP49450 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.92□□□□□ -0.18
CENPAP49450 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.91□□□□□ -0.18
CENPAP49450 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms