Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CSNK1DP48730 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.2■□□□□ 0.02
CSNK1DP48730 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1DP48730 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1DP48730 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.19■□□□□ 0.02
CSNK1DP48730 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1DP48730 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1DP48730 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CSNK1DP48730 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.19■□□□□ 0.02
CSNK1DP48730 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CSNK1DP48730 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1DP48730 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
CSNK1DP48730 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CSNK1DP48730 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1DP48730 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1DP48730 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1DP48730 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1DP48730 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.19■□□□□ 0.02
CSNK1DP48730 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1DP48730 MIR1202-201ENST00000408529 83 ntBASIC15.19■□□□□ 0.02
CSNK1DP48730 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.19■□□□□ 0.02
CSNK1DP48730 HLA-V-201ENST00000429037 534 ntBASIC15.19■□□□□ 0.02
CSNK1DP48730 AC007969.1-201ENST00000433675 447 ntBASIC15.19■□□□□ 0.02
CSNK1DP48730 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.19■□□□□ 0.02
CSNK1DP48730 RNA5SP412-201ENST00000516234 123 ntBASIC15.19■□□□□ 0.02
CSNK1DP48730 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.19■□□□□ 0.02
CSNK1DP48730 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.19■□□□□ 0.02
CSNK1DP48730 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.19■□□□□ 0.02
CSNK1DP48730 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1DP48730 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.19■□□□□ 0.02
CSNK1DP48730 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1DP48730 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1DP48730 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.19■□□□□ 0.02
CSNK1DP48730 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1DP48730 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1DP48730 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1DP48730 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1DP48730 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.19■□□□□ 0.02
CSNK1DP48730 FKBP4P6-201ENST00000457486 1332 ntBASIC15.18■□□□□ 0.02
CSNK1DP48730 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1DP48730 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
CSNK1DP48730 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1DP48730 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.18■□□□□ 0.02
CSNK1DP48730 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1DP48730 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1DP48730 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1DP48730 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.18■□□□□ 0.02
CSNK1DP48730 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1DP48730 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1DP48730 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1DP48730 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1DP48730 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1DP48730 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1DP48730 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.18■□□□□ 0.02
CSNK1DP48730 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1DP48730 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1DP48730 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.18■□□□□ 0.02
CSNK1DP48730 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1DP48730 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1DP48730 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.18■□□□□ 0.02
CSNK1DP48730 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.18■□□□□ 0.02
CSNK1DP48730 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1DP48730 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1DP48730 RN7SL713P-201ENST00000582127 302 ntBASIC15.18■□□□□ 0.02
CSNK1DP48730 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.18■□□□□ 0.02
CSNK1DP48730 MIR6752-201ENST00000618442 71 ntBASIC15.18■□□□□ 0.02
CSNK1DP48730 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CSNK1DP48730 DBET-201ENST00000630918 3363 ntBASIC15.18■□□□□ 0.02
CSNK1DP48730 AC003102.2-201ENST00000589195 1469 ntBASIC15.18■□□□□ 0.02
CSNK1DP48730 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CSNK1DP48730 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.18■□□□□ 0.02
CSNK1DP48730 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
CSNK1DP48730 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1DP48730 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1DP48730 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1DP48730 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1DP48730 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.18■□□□□ 0.02
CSNK1DP48730 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1DP48730 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1DP48730 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CSNK1DP48730 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1DP48730 AP002414.2-201ENST00000591780 3365 ntBASIC15.18■□□□□ 0.02
CSNK1DP48730 AL354989.2-201ENST00000435838 1540 ntBASIC15.17■□□□□ 0.02
CSNK1DP48730 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CSNK1DP48730 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CSNK1DP48730 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1DP48730 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CSNK1DP48730 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.17■□□□□ 0.02
CSNK1DP48730 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CSNK1DP48730 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms