Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC007787.1-201ENST00000588095 1583 ntBASIC13.6□□□□□ -0.23
CSNK1A1P48729 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.6□□□□□ -0.23
CSNK1A1P48729 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.6□□□□□ -0.23
CSNK1A1P48729 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSNK1A1P48729 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 AC140912.1-201ENST00000577171 1054 ntBASIC13.59□□□□□ -0.23
CSNK1A1P48729 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 CHCHD2P3-201ENST00000603038 451 ntBASIC13.59□□□□□ -0.23
CSNK1A1P48729 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.59□□□□□ -0.23
CSNK1A1P48729 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.59□□□□□ -0.23
CSNK1A1P48729 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CSNK1A1P48729 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.59□□□□□ -0.23
CSNK1A1P48729 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms