Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ARCN1P48444 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ARCN1P48444 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
ARCN1P48444 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ARCN1P48444 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
ARCN1P48444 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ARCN1P48444 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ARCN1P48444 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
ARCN1P48444 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ARCN1P48444 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ARCN1P48444 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARCN1P48444 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARCN1P48444 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
ARCN1P48444 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ARCN1P48444 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ARCN1P48444 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARCN1P48444 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARCN1P48444 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ARCN1P48444 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.26■□□□□ 0.03
ARCN1P48444 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.26■□□□□ 0.03
ARCN1P48444 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARCN1P48444 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARCN1P48444 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARCN1P48444 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARCN1P48444 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ARCN1P48444 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.26■□□□□ 0.03
ARCN1P48444 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.26■□□□□ 0.03
ARCN1P48444 AL645937.2-201ENST00000396808 931 ntBASIC15.26■□□□□ 0.03
ARCN1P48444 DGCR5-201ENST00000399539 862 ntBASIC15.26■□□□□ 0.03
ARCN1P48444 MEP1AP4-201ENST00000423244 1087 ntBASIC15.26■□□□□ 0.03
ARCN1P48444 AC005034.1-201ENST00000426657 489 ntBASIC15.26■□□□□ 0.03
ARCN1P48444 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.26■□□□□ 0.03
ARCN1P48444 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ARCN1P48444 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ARCN1P48444 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.26■□□□□ 0.03
ARCN1P48444 TP53TG3HP-202ENST00000569755 579 ntBASIC15.26■□□□□ 0.03
ARCN1P48444 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.26■□□□□ 0.03
ARCN1P48444 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ARCN1P48444 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.26■□□□□ 0.03
ARCN1P48444 AC012645.4-201ENST00000610691 1061 ntBASIC15.26■□□□□ 0.03
ARCN1P48444 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ARCN1P48444 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ARCN1P48444 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.26■□□□□ 0.03
ARCN1P48444 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
ARCN1P48444 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ARCN1P48444 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARCN1P48444 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ARCN1P48444 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARCN1P48444 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ARCN1P48444 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.26■□□□□ 0.03
ARCN1P48444 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARCN1P48444 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ARCN1P48444 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
ARCN1P48444 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARCN1P48444 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.26■□□□□ 0.03
ARCN1P48444 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.26■□□□□ 0.03
ARCN1P48444 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ARCN1P48444 SNX18-202ENST00000343017 3140 ntBASIC15.26■□□□□ 0.03
ARCN1P48444 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.25■□□□□ 0.03
ARCN1P48444 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.25■□□□□ 0.03
ARCN1P48444 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
ARCN1P48444 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 AC063926.2-201ENST00000623766 1308 ntBASIC15.25■□□□□ 0.03
ARCN1P48444 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ARCN1P48444 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.25■□□□□ 0.03
ARCN1P48444 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
ARCN1P48444 AC098850.1-201ENST00000419919 790 ntBASIC15.25■□□□□ 0.03
ARCN1P48444 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.25■□□□□ 0.03
ARCN1P48444 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.25■□□□□ 0.03
ARCN1P48444 AC123567.1-201ENST00000548294 1261 ntBASIC15.25■□□□□ 0.03
ARCN1P48444 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.25■□□□□ 0.03
ARCN1P48444 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.25■□□□□ 0.03
ARCN1P48444 AC027307.3-201ENST00000594262 1100 ntBASIC15.25■□□□□ 0.03
ARCN1P48444 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.25■□□□□ 0.03
ARCN1P48444 AC099568.2-201ENST00000609194 695 ntBASIC15.25■□□□□ 0.03
ARCN1P48444 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
ARCN1P48444 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ARCN1P48444 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ARCN1P48444 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.25■□□□□ 0.03
ARCN1P48444 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.25■□□□□ 0.03
ARCN1P48444 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARCN1P48444 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms