Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.57■□□□□ 0.24
HTTP42858 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.57■□□□□ 0.24
HTTP42858 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTTP42858 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.57■□□□□ 0.24
HTTP42858 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTTP42858 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HTTP42858 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTTP42858 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HTTP42858 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTTP42858 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.57■□□□□ 0.24
HTTP42858 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC16.56■□□□□ 0.24
HTTP42858 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.56■□□□□ 0.24
HTTP42858 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HTTP42858 AC083801.1-201ENST00000491689 358 ntBASIC16.56■□□□□ 0.24
HTTP42858 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HTTP42858 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.56■□□□□ 0.24
HTTP42858 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTTP42858 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTTP42858 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTTP42858 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.56■□□□□ 0.24
HTTP42858 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTTP42858 AC006504.5-208ENST00000588784 2401 ntBASIC16.56■□□□□ 0.24
HTTP42858 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.56■□□□□ 0.24
HTTP42858 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTTP42858 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.56■□□□□ 0.24
HTTP42858 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTTP42858 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC16.56■□□□□ 0.24
HTTP42858 IGHV1-12-201ENST00000518307 205 ntBASIC16.56■□□□□ 0.24
HTTP42858 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.56■□□□□ 0.24
HTTP42858 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTTP42858 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HTTP42858 CHCHD2P2-201ENST00000503744 321 ntBASIC16.56■□□□□ 0.24
HTTP42858 CTBP2P6-201ENST00000526402 1229 ntBASIC16.56■□□□□ 0.24
HTTP42858 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
HTTP42858 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HTTP42858 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HTTP42858 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HTTP42858 NKILA-202ENST00000614771 2598 ntBASIC16.56■□□□□ 0.24
HTTP42858 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
HTTP42858 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.55■□□□□ 0.24
HTTP42858 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
HTTP42858 GEMIN8P4-201ENST00000380526 729 ntBASIC16.55■□□□□ 0.24
HTTP42858 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.55■□□□□ 0.24
HTTP42858 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HTTP42858 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.55■□□□□ 0.24
HTTP42858 AL929302.1-201ENST00000426556 871 ntBASIC16.55■□□□□ 0.24
HTTP42858 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.55■□□□□ 0.24
HTTP42858 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC16.55■□□□□ 0.24
HTTP42858 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.55■□□□□ 0.24
HTTP42858 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HTTP42858 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC16.55■□□□□ 0.24
HTTP42858 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.55■□□□□ 0.24
HTTP42858 AC003686.1-201ENST00000550956 1034 ntBASIC16.55■□□□□ 0.24
HTTP42858 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC16.55■□□□□ 0.24
HTTP42858 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC16.55■□□□□ 0.24
HTTP42858 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HTTP42858 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.55■□□□□ 0.24
HTTP42858 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.55■□□□□ 0.24
HTTP42858 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HTTP42858 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.55■□□□□ 0.24
HTTP42858 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.55■□□□□ 0.24
HTTP42858 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC16.55■□□□□ 0.24
HTTP42858 FAM86B3P-203ENST00000523992 854 ntBASIC16.55■□□□□ 0.24
HTTP42858 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HTTP42858 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.55■□□□□ 0.24
HTTP42858 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
HTTP42858 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTTP42858 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
HTTP42858 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HTTP42858 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HTTP42858 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC16.54■□□□□ 0.24
HTTP42858 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.54■□□□□ 0.24
HTTP42858 AC010976.2-201ENST00000609697 852 ntBASIC16.54■□□□□ 0.24
HTTP42858 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.54■□□□□ 0.24
HTTP42858 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.54■□□□□ 0.24
HTTP42858 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HTTP42858 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HTTP42858 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms