Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HADHAP40939 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HADHAP40939 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
HADHAP40939 AC012508.2-201ENST00000567613 1472 ntBASIC15.46■□□□□ 0.07
HADHAP40939 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HADHAP40939 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.46■□□□□ 0.07
HADHAP40939 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HADHAP40939 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HADHAP40939 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HADHAP40939 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.46■□□□□ 0.07
HADHAP40939 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HADHAP40939 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.46■□□□□ 0.07
HADHAP40939 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HADHAP40939 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.46■□□□□ 0.07
HADHAP40939 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HADHAP40939 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HADHAP40939 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HADHAP40939 DFFBP1-201ENST00000433250 979 ntBASIC15.46■□□□□ 0.07
HADHAP40939 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.46■□□□□ 0.07
HADHAP40939 GNAQP1-201ENST00000444815 1067 ntBASIC15.46■□□□□ 0.07
HADHAP40939 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.46■□□□□ 0.07
HADHAP40939 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.46■□□□□ 0.07
HADHAP40939 SERBP1P5-201ENST00000510079 1181 ntBASIC15.46■□□□□ 0.07
HADHAP40939 AC104596.2-201ENST00000512793 793 ntBASIC15.46■□□□□ 0.07
HADHAP40939 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.46■□□□□ 0.07
HADHAP40939 AC190387.1-201ENST00000551683 408 ntBASIC15.46■□□□□ 0.07
HADHAP40939 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.46■□□□□ 0.07
HADHAP40939 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.46■□□□□ 0.07
HADHAP40939 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.46■□□□□ 0.07
HADHAP40939 AC004233.3-201ENST00000607794 1269 ntBASIC15.46■□□□□ 0.07
HADHAP40939 AC004790.1-201ENST00000612686 536 ntBASIC15.46■□□□□ 0.07
HADHAP40939 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HADHAP40939 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.46■□□□□ 0.07
HADHAP40939 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
HADHAP40939 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
HADHAP40939 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HADHAP40939 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HADHAP40939 SLC7A15P-201ENST00000424028 1363 ntBASIC15.46■□□□□ 0.07
HADHAP40939 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HADHAP40939 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HADHAP40939 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HADHAP40939 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HADHAP40939 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HADHAP40939 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HADHAP40939 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HADHAP40939 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.46■□□□□ 0.06
HADHAP40939 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HADHAP40939 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
HADHAP40939 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HADHAP40939 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HADHAP40939 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HADHAP40939 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.45■□□□□ 0.06
HADHAP40939 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
HADHAP40939 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HADHAP40939 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.45■□□□□ 0.06
HADHAP40939 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HADHAP40939 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 AC087499.6-201ENST00000411576 835 ntBASIC15.45■□□□□ 0.06
HADHAP40939 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.45■□□□□ 0.06
HADHAP40939 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.45■□□□□ 0.06
HADHAP40939 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.45■□□□□ 0.06
HADHAP40939 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.45■□□□□ 0.06
HADHAP40939 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.45■□□□□ 0.06
HADHAP40939 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.45■□□□□ 0.06
HADHAP40939 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.45■□□□□ 0.06
HADHAP40939 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.45■□□□□ 0.06
HADHAP40939 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 AC005089.1-201ENST00000619486 2241 ntBASIC15.45■□□□□ 0.06
HADHAP40939 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HADHAP40939 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.45■□□□□ 0.06
HADHAP40939 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HADHAP40939 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
HADHAP40939 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.45■□□□□ 0.06
HADHAP40939 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HADHAP40939 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HADHAP40939 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HADHAP40939 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HADHAP40939 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HADHAP40939 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HADHAP40939 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HADHAP40939 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HADHAP40939 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HADHAP40939 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms