Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.63□□□□□ -0.39
SNCAP37840 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.63□□□□□ -0.39
SNCAP37840 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SNCAP37840 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.63□□□□□ -0.39
SNCAP37840 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.63□□□□□ -0.39
SNCAP37840 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.63□□□□□ -0.39
SNCAP37840 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
SNCAP37840 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.63□□□□□ -0.39
SNCAP37840 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.63□□□□□ -0.39
SNCAP37840 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.63□□□□□ -0.39
SNCAP37840 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.63□□□□□ -0.39
SNCAP37840 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.63□□□□□ -0.39
SNCAP37840 AC099522.2-201ENST00000607001 744 ntBASIC12.63□□□□□ -0.39
SNCAP37840 AC027601.4-201ENST00000611259 610 ntBASIC12.63□□□□□ -0.39
SNCAP37840 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.63□□□□□ -0.39
SNCAP37840 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SNCAP37840 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.63□□□□□ -0.39
SNCAP37840 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.63□□□□□ -0.39
SNCAP37840 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SNCAP37840 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SNCAP37840 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.63□□□□□ -0.39
SNCAP37840 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
SNCAP37840 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
SNCAP37840 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNCAP37840 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
SNCAP37840 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SNCAP37840 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SNCAP37840 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SNCAP37840 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.62□□□□□ -0.39
SNCAP37840 AC092053.3-201ENST00000641308 4975 ntBASIC12.62□□□□□ -0.39
SNCAP37840 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 FAM220BP-201ENST00000377689 816 ntBASIC12.62□□□□□ -0.39
SNCAP37840 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 HLA-H-201ENST00000383620 1096 ntBASIC12.62□□□□□ -0.39
SNCAP37840 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
SNCAP37840 AL355306.1-201ENST00000415580 579 ntBASIC12.62□□□□□ -0.39
SNCAP37840 MED15P5-201ENST00000423150 992 ntBASIC12.62□□□□□ -0.39
SNCAP37840 RPS8P6-201ENST00000426177 609 ntBASIC12.62□□□□□ -0.39
SNCAP37840 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.62□□□□□ -0.39
SNCAP37840 SPDYE11-202ENST00000450699 704 ntBASIC12.62□□□□□ -0.39
SNCAP37840 KRT18P3-201ENST00000451602 1288 ntBASIC12.62□□□□□ -0.39
SNCAP37840 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.62□□□□□ -0.39
SNCAP37840 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.62□□□□□ -0.39
SNCAP37840 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.62□□□□□ -0.39
SNCAP37840 SPDYE9P-201ENST00000570642 692 ntBASIC12.62□□□□□ -0.39
SNCAP37840 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SNCAP37840 SPDYE10P-202ENST00000612005 668 ntBASIC12.62□□□□□ -0.39
SNCAP37840 SPDYE8P-202ENST00000612377 668 ntBASIC12.62□□□□□ -0.39
SNCAP37840 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.62□□□□□ -0.39
SNCAP37840 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SNCAP37840 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
SNCAP37840 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SNCAP37840 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SNCAP37840 KRT8P37-201ENST00000451609 1420 ntBASIC12.62□□□□□ -0.39
SNCAP37840 PPT1-213ENST00000641319 2388 ntBASIC12.62□□□□□ -0.39
SNCAP37840 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.62□□□□□ -0.39
SNCAP37840 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SNCAP37840 IL9RP2-201ENST00000423948 1312 ntBASIC12.62□□□□□ -0.39
SNCAP37840 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.62□□□□□ -0.39
SNCAP37840 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.61□□□□□ -0.39
SNCAP37840 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNCAP37840 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.61□□□□□ -0.39
SNCAP37840 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.61□□□□□ -0.39
SNCAP37840 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms