Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN1P35523 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.41■□□□□ 0.38
CLCN1P35523 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN1P35523 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.41■□□□□ 0.38
CLCN1P35523 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.41■□□□□ 0.38
CLCN1P35523 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.41■□□□□ 0.38
CLCN1P35523 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CLCN1P35523 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.41■□□□□ 0.38
CLCN1P35523 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.41■□□□□ 0.38
CLCN1P35523 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.41■□□□□ 0.38
CLCN1P35523 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN1P35523 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC17.41■□□□□ 0.38
CLCN1P35523 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN1P35523 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN1P35523 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLCN1P35523 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC17.41■□□□□ 0.38
CLCN1P35523 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN1P35523 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CLCN1P35523 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN1P35523 PMS2P7-201ENST00000506558 1336 ntBASIC17.41■□□□□ 0.38
CLCN1P35523 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.41■□□□□ 0.38
CLCN1P35523 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.41■□□□□ 0.38
CLCN1P35523 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN1P35523 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CLCN1P35523 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN1P35523 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN1P35523 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CLCN1P35523 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 BNIP3P1-202ENST00000550043 1585 ntBASIC17.4■□□□□ 0.38
CLCN1P35523 KCP-203ENST00000610776 5108 ntTSL 5 BASIC17.4■□□□□ 0.38
CLCN1P35523 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLCN1P35523 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 AC087386.2-201ENST00000623212 4637 ntBASIC17.4■□□□□ 0.38
CLCN1P35523 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.4■□□□□ 0.38
CLCN1P35523 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CLCN1P35523 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.4■□□□□ 0.38
CLCN1P35523 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.4■□□□□ 0.38
CLCN1P35523 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLCN1P35523 AC004945.1-201ENST00000416738 983 ntBASIC17.4■□□□□ 0.38
CLCN1P35523 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.4■□□□□ 0.38
CLCN1P35523 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CLCN1P35523 AC243562.1-201ENST00000560672 389 ntBASIC17.4■□□□□ 0.38
CLCN1P35523 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.4■□□□□ 0.38
CLCN1P35523 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.4■□□□□ 0.38
CLCN1P35523 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.4■□□□□ 0.38
CLCN1P35523 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLCN1P35523 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC17.4■□□□□ 0.38
CLCN1P35523 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLCN1P35523 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLCN1P35523 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLCN1P35523 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CLCN1P35523 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC17.4■□□□□ 0.38
CLCN1P35523 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN1P35523 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.39■□□□□ 0.38
CLCN1P35523 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CLCN1P35523 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCN1P35523 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLCN1P35523 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLCN1P35523 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCN1P35523 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCN1P35523 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CLCN1P35523 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CLCN1P35523 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCN1P35523 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLCN1P35523 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCN1P35523 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLCN1P35523 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CLCN1P35523 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLCN1P35523 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLCN1P35523 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCN1P35523 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLCN1P35523 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.39■□□□□ 0.37
CLCN1P35523 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLCN1P35523 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.39■□□□□ 0.37
CLCN1P35523 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCN1P35523 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCN1P35523 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCN1P35523 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.39■□□□□ 0.37
CLCN1P35523 AL365330.1-201ENST00000607459 531 ntBASIC17.39■□□□□ 0.37
CLCN1P35523 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCN1P35523 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms