Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS2P33552 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS2P33552 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 PTPRVP-205ENST00000641549 5067 ntBASIC11.28□□□□□ -0.6
CKS2P33552 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.28□□□□□ -0.6
CKS2P33552 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS2P33552 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS2P33552 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS2P33552 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
CKS2P33552 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CKS2P33552 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.28□□□□□ -0.6
CKS2P33552 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CKS2P33552 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CKS2P33552 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CKS2P33552 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.28□□□□□ -0.6
CKS2P33552 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CKS2P33552 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.27□□□□□ -0.6
CKS2P33552 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
CKS2P33552 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
CKS2P33552 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CKS2P33552 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC11.27□□□□□ -0.6
CKS2P33552 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC11.27□□□□□ -0.6
CKS2P33552 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
CKS2P33552 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
CKS2P33552 TCAF1P1-201ENST00000414990 2232 ntBASIC11.27□□□□□ -0.61
CKS2P33552 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
CKS2P33552 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CKS2P33552 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS2P33552 AC005562.1-201ENST00000583030 3219 ntBASIC11.27□□□□□ -0.61
CKS2P33552 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS2P33552 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS2P33552 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
CKS2P33552 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CKS2P33552 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.27□□□□□ -0.61
CKS2P33552 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.27□□□□□ -0.61
CKS2P33552 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
CKS2P33552 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC11.27□□□□□ -0.61
CKS2P33552 AC098859.1-201ENST00000502915 1238 ntBASIC11.27□□□□□ -0.61
CKS2P33552 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
CKS2P33552 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.27□□□□□ -0.61
CKS2P33552 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.27□□□□□ -0.61
CKS2P33552 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.27□□□□□ -0.61
CKS2P33552 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS2P33552 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.27□□□□□ -0.61
CKS2P33552 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC11.27□□□□□ -0.61
CKS2P33552 AL356488.2-201ENST00000602755 427 ntBASIC11.27□□□□□ -0.61
CKS2P33552 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.27□□□□□ -0.61
CKS2P33552 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC11.27□□□□□ -0.61
CKS2P33552 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
CKS2P33552 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS2P33552 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS2P33552 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS2P33552 OR2I1P-208ENST00000641137 4948 ntBASIC11.27□□□□□ -0.61
CKS2P33552 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS2P33552 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.27□□□□□ -0.61
CKS2P33552 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS2P33552 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
CKS2P33552 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS2P33552 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS2P33552 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CKS2P33552 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS2P33552 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.27□□□□□ -0.61
CKS2P33552 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS2P33552 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
CKS2P33552 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
CKS2P33552 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CKS2P33552 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS2P33552 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
CKS2P33552 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.27□□□□□ -0.61
CKS2P33552 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS2P33552 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CKS2P33552 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS2P33552 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.26□□□□□ -0.61
CKS2P33552 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.26□□□□□ -0.61
CKS2P33552 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.26□□□□□ -0.61
CKS2P33552 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
CKS2P33552 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.26□□□□□ -0.61
CKS2P33552 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
CKS2P33552 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CKS2P33552 AL805961.2-201ENST00000642139 4817 ntBASIC11.26□□□□□ -0.61
CKS2P33552 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.26□□□□□ -0.61
CKS2P33552 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC11.26□□□□□ -0.61
CKS2P33552 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS2P33552 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms