Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.53■□□□□ 0.08
PTPN3P26045 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.53■□□□□ 0.08
PTPN3P26045 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 PIN1P1-201ENST00000412108 996 ntBASIC15.53■□□□□ 0.08
PTPN3P26045 SOCS2P1-201ENST00000417727 557 ntBASIC15.53■□□□□ 0.08
PTPN3P26045 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
PTPN3P26045 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.53■□□□□ 0.08
PTPN3P26045 AP001582.1-201ENST00000525856 295 ntBASIC15.53■□□□□ 0.08
PTPN3P26045 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.53■□□□□ 0.08
PTPN3P26045 WASH4P-201ENST00000564273 1246 ntBASIC15.53■□□□□ 0.08
PTPN3P26045 CTBP2P3-201ENST00000585629 1255 ntBASIC15.53■□□□□ 0.08
PTPN3P26045 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.53■□□□□ 0.08
PTPN3P26045 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.53■□□□□ 0.08
PTPN3P26045 AC008494.3-201ENST00000606615 944 ntBASIC15.53■□□□□ 0.08
PTPN3P26045 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.53■□□□□ 0.08
PTPN3P26045 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.53■□□□□ 0.08
PTPN3P26045 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.53■□□□□ 0.08
PTPN3P26045 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
PTPN3P26045 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PTPN3P26045 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.53■□□□□ 0.08
PTPN3P26045 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.53■□□□□ 0.08
PTPN3P26045 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.53■□□□□ 0.08
PTPN3P26045 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PTPN3P26045 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
PTPN3P26045 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.52■□□□□ 0.08
PTPN3P26045 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PTPN3P26045 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 AC007292.2-201ENST00000593524 1812 ntBASIC15.52■□□□□ 0.08
PTPN3P26045 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.52■□□□□ 0.08
PTPN3P26045 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PTPN3P26045 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.52■□□□□ 0.08
PTPN3P26045 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.52■□□□□ 0.08
PTPN3P26045 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.52■□□□□ 0.08
PTPN3P26045 AL513477.1-201ENST00000602865 2407 ntBASIC15.52■□□□□ 0.08
PTPN3P26045 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.52■□□□□ 0.08
PTPN3P26045 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 AC007686.3-201ENST00000619017 3487 ntBASIC15.52■□□□□ 0.08
PTPN3P26045 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.52■□□□□ 0.08
PTPN3P26045 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.52■□□□□ 0.08
PTPN3P26045 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 RNU1-114P-201ENST00000365297 166 ntBASIC15.52■□□□□ 0.08
PTPN3P26045 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PTPN3P26045 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PTPN3P26045 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 AC190387.1-201ENST00000551683 408 ntBASIC15.52■□□□□ 0.08
PTPN3P26045 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.52■□□□□ 0.08
PTPN3P26045 AC133539.2-201ENST00000604757 467 ntBASIC15.52■□□□□ 0.08
PTPN3P26045 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
PTPN3P26045 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTPN3P26045 FAM45BP-202ENST00000592932 1624 ntBASIC15.52■□□□□ 0.08
PTPN3P26045 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
PTPN3P26045 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.07
PTPN3P26045 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PTPN3P26045 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN3P26045 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
PTPN3P26045 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.52■□□□□ 0.07
PTPN3P26045 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.52■□□□□ 0.07
PTPN3P26045 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN3P26045 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.52■□□□□ 0.07
PTPN3P26045 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN3P26045 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN3P26045 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.52■□□□□ 0.07
PTPN3P26045 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.52■□□□□ 0.07
PTPN3P26045 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
PTPN3P26045 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN3P26045 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN3P26045 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.52■□□□□ 0.07
PTPN3P26045 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
PTPN3P26045 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTPN3P26045 AC018442.1-201ENST00000421439 2061 ntBASIC15.52■□□□□ 0.07
PTPN3P26045 AC232323.1-201ENST00000540724 2099 ntBASIC15.52■□□□□ 0.07
PTPN3P26045 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms