Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.88□□□□□ -0.35
COL8A2P25067 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.88□□□□□ -0.35
COL8A2P25067 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.87□□□□□ -0.35
COL8A2P25067 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.87□□□□□ -0.35
COL8A2P25067 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
COL8A2P25067 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.87□□□□□ -0.35
COL8A2P25067 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
COL8A2P25067 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
COL8A2P25067 AC006001.1-201ENST00000325130 474 ntBASIC12.87□□□□□ -0.35
COL8A2P25067 FAM86MP-201ENST00000340703 885 ntBASIC12.87□□□□□ -0.35
COL8A2P25067 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.87□□□□□ -0.35
COL8A2P25067 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
COL8A2P25067 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.87□□□□□ -0.35
COL8A2P25067 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.87□□□□□ -0.35
COL8A2P25067 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.87□□□□□ -0.35
COL8A2P25067 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.87□□□□□ -0.35
COL8A2P25067 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.87□□□□□ -0.35
COL8A2P25067 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.87□□□□□ -0.35
COL8A2P25067 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.87□□□□□ -0.35
COL8A2P25067 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.87□□□□□ -0.35
COL8A2P25067 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.87□□□□□ -0.35
COL8A2P25067 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.87□□□□□ -0.35
COL8A2P25067 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
COL8A2P25067 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
COL8A2P25067 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.87□□□□□ -0.35
COL8A2P25067 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
COL8A2P25067 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
COL8A2P25067 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
COL8A2P25067 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.87□□□□□ -0.35
COL8A2P25067 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL8A2P25067 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.86□□□□□ -0.35
COL8A2P25067 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
COL8A2P25067 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.86□□□□□ -0.35
COL8A2P25067 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
COL8A2P25067 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.86□□□□□ -0.35
COL8A2P25067 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.86□□□□□ -0.35
COL8A2P25067 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 MIR1202-201ENST00000408529 83 ntBASIC12.86□□□□□ -0.35
COL8A2P25067 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
COL8A2P25067 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.86□□□□□ -0.35
COL8A2P25067 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.86□□□□□ -0.35
COL8A2P25067 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.86□□□□□ -0.35
COL8A2P25067 AL590640.2-201ENST00000457038 527 ntBASIC12.86□□□□□ -0.35
COL8A2P25067 RNA5SP486-201ENST00000515961 83 ntBASIC12.86□□□□□ -0.35
COL8A2P25067 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.86□□□□□ -0.35
COL8A2P25067 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms