Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MMP8P22894 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
MMP8P22894 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MMP8P22894 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.98■□□□□ 0.15
MMP8P22894 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.98■□□□□ 0.15
MMP8P22894 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
MMP8P22894 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.98■□□□□ 0.15
MMP8P22894 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.98■□□□□ 0.15
MMP8P22894 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.98■□□□□ 0.15
MMP8P22894 AL033527.5-201ENST00000641382 801 ntBASIC15.98■□□□□ 0.15
MMP8P22894 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.98■□□□□ 0.15
MMP8P22894 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
MMP8P22894 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
MMP8P22894 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
MMP8P22894 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MMP8P22894 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MMP8P22894 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MMP8P22894 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
MMP8P22894 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.98■□□□□ 0.15
MMP8P22894 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MMP8P22894 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.98■□□□□ 0.15
MMP8P22894 AC018665.1-201ENST00000622927 1362 ntBASIC15.98■□□□□ 0.15
MMP8P22894 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.98■□□□□ 0.15
MMP8P22894 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
MMP8P22894 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
MMP8P22894 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MMP8P22894 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.97■□□□□ 0.15
MMP8P22894 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
MMP8P22894 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.97■□□□□ 0.15
MMP8P22894 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MMP8P22894 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP8P22894 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP8P22894 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
MMP8P22894 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP8P22894 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MMP8P22894 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP8P22894 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP8P22894 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.97■□□□□ 0.15
MMP8P22894 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP8P22894 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP8P22894 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP8P22894 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.97■□□□□ 0.15
MMP8P22894 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP8P22894 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.97■□□□□ 0.15
MMP8P22894 AC093433.1-201ENST00000458048 571 ntBASIC15.97■□□□□ 0.15
MMP8P22894 AC026434.2-201ENST00000506094 1078 ntBASIC15.97■□□□□ 0.15
MMP8P22894 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.97■□□□□ 0.15
MMP8P22894 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.97■□□□□ 0.15
MMP8P22894 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MMP8P22894 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MMP8P22894 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP8P22894 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
MMP8P22894 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP8P22894 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MMP8P22894 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP8P22894 AC023908.3-201ENST00000564211 3047 ntBASIC15.97■□□□□ 0.15
MMP8P22894 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MMP8P22894 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.96■□□□□ 0.15
MMP8P22894 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.96■□□□□ 0.15
MMP8P22894 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
MMP8P22894 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
MMP8P22894 AC055811.4-201ENST00000624039 1754 ntBASIC15.96■□□□□ 0.15
MMP8P22894 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.96■□□□□ 0.15
MMP8P22894 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.96■□□□□ 0.15
MMP8P22894 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.96■□□□□ 0.15
MMP8P22894 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 AC022137.2-201ENST00000503482 481 ntBASIC15.96■□□□□ 0.15
MMP8P22894 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.96■□□□□ 0.15
MMP8P22894 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.96■□□□□ 0.15
MMP8P22894 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
MMP8P22894 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
MMP8P22894 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.96■□□□□ 0.15
MMP8P22894 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.96■□□□□ 0.15
MMP8P22894 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.96■□□□□ 0.15
MMP8P22894 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
MMP8P22894 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.96■□□□□ 0.15
MMP8P22894 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP8P22894 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
MMP8P22894 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
MMP8P22894 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP8P22894 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.95■□□□□ 0.14
MMP8P22894 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP8P22894 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms