Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ERCC3P19447 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.65■□□□□ 0.42
ERCC3P19447 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.65■□□□□ 0.42
ERCC3P19447 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
ERCC3P19447 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.65■□□□□ 0.42
ERCC3P19447 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.65■□□□□ 0.42
ERCC3P19447 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ERCC3P19447 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ERCC3P19447 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC3P19447 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ERCC3P19447 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
ERCC3P19447 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.64■□□□□ 0.42
ERCC3P19447 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ERCC3P19447 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC3P19447 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ERCC3P19447 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.64■□□□□ 0.41
ERCC3P19447 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC3P19447 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC3P19447 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC3P19447 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC3P19447 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC3P19447 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.64■□□□□ 0.41
ERCC3P19447 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.64■□□□□ 0.41
ERCC3P19447 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.64■□□□□ 0.41
ERCC3P19447 AP006547.1-201ENST00000563435 692 ntBASIC17.64■□□□□ 0.41
ERCC3P19447 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.64■□□□□ 0.41
ERCC3P19447 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.64■□□□□ 0.41
ERCC3P19447 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.64■□□□□ 0.41
ERCC3P19447 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.64■□□□□ 0.41
ERCC3P19447 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC3P19447 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC3P19447 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC3P19447 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.64■□□□□ 0.41
ERCC3P19447 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ERCC3P19447 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.64■□□□□ 0.41
ERCC3P19447 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC3P19447 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ERCC3P19447 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.64■□□□□ 0.41
ERCC3P19447 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.63■□□□□ 0.41
ERCC3P19447 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ERCC3P19447 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC3P19447 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC3P19447 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC3P19447 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC3P19447 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC3P19447 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.63■□□□□ 0.41
ERCC3P19447 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC3P19447 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC3P19447 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC3P19447 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC3P19447 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
ERCC3P19447 CALR4P-201ENST00000431943 946 ntBASIC17.63■□□□□ 0.41
ERCC3P19447 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.63■□□□□ 0.41
ERCC3P19447 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.63■□□□□ 0.41
ERCC3P19447 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.63■□□□□ 0.41
ERCC3P19447 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.63■□□□□ 0.41
ERCC3P19447 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.63■□□□□ 0.41
ERCC3P19447 AL096828.3-201ENST00000615354 462 ntBASIC17.63■□□□□ 0.41
ERCC3P19447 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.63■□□□□ 0.41
ERCC3P19447 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC3P19447 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC3P19447 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC3P19447 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC3P19447 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ERCC3P19447 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC3P19447 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.63■□□□□ 0.41
ERCC3P19447 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
ERCC3P19447 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC3P19447 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ERCC3P19447 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC3P19447 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC3P19447 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC3P19447 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC3P19447 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ERCC3P19447 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ERCC3P19447 AC099063.4-201ENST00000641099 1602 ntBASIC17.62■□□□□ 0.41
ERCC3P19447 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.62■□□□□ 0.41
ERCC3P19447 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC3P19447 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ERCC3P19447 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
ERCC3P19447 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ERCC3P19447 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC3P19447 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC3P19447 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.62■□□□□ 0.41
ERCC3P19447 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC3P19447 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ERCC3P19447 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC3P19447 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC3P19447 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.62■□□□□ 0.41
ERCC3P19447 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.62■□□□□ 0.41
ERCC3P19447 CNN2P10-201ENST00000443067 918 ntBASIC17.62■□□□□ 0.41
ERCC3P19447 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC3P19447 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.62■□□□□ 0.41
ERCC3P19447 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC3P19447 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.62■□□□□ 0.41
ERCC3P19447 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ERCC3P19447 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms