Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NCLP19338 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLP19338 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
NCLP19338 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NCLP19338 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC18.27■□□□□ 0.52
NCLP19338 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLP19338 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
NCLP19338 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLP19338 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
NCLP19338 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLP19338 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.27■□□□□ 0.52
NCLP19338 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.27■□□□□ 0.52
NCLP19338 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
NCLP19338 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLP19338 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.27■□□□□ 0.52
NCLP19338 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.27■□□□□ 0.52
NCLP19338 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.27■□□□□ 0.52
NCLP19338 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.27■□□□□ 0.52
NCLP19338 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.27■□□□□ 0.52
NCLP19338 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.27■□□□□ 0.52
NCLP19338 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.27■□□□□ 0.52
NCLP19338 AC009093.7-201ENST00000623853 1223 ntBASIC18.27■□□□□ 0.52
NCLP19338 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18.27■□□□□ 0.52
NCLP19338 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLP19338 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLP19338 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLP19338 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLP19338 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCLP19338 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.27■□□□□ 0.52
NCLP19338 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
NCLP19338 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
NCLP19338 AL731571.1-201ENST00000617058 5428 ntBASIC18.27■□□□□ 0.51
NCLP19338 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NCLP19338 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NCLP19338 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NCLP19338 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NCLP19338 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCLP19338 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NCLP19338 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
NCLP19338 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.26■□□□□ 0.51
NCLP19338 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NCLP19338 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NCLP19338 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NCLP19338 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCLP19338 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC18.26■□□□□ 0.51
NCLP19338 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NCLP19338 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NCLP19338 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC18.26■□□□□ 0.51
NCLP19338 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCLP19338 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.26■□□□□ 0.51
NCLP19338 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.26■□□□□ 0.51
NCLP19338 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.26■□□□□ 0.51
NCLP19338 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.26■□□□□ 0.51
NCLP19338 AL592309.1-201ENST00000443127 649 ntBASIC18.26■□□□□ 0.51
NCLP19338 AC109322.1-201ENST00000524499 1264 ntBASIC18.26■□□□□ 0.51
NCLP19338 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
NCLP19338 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.26■□□□□ 0.51
NCLP19338 AC004449.1-201ENST00000564240 433 ntBASIC18.26■□□□□ 0.51
NCLP19338 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.26■□□□□ 0.51
NCLP19338 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.26■□□□□ 0.51
NCLP19338 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.26■□□□□ 0.51
NCLP19338 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
NCLP19338 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.26■□□□□ 0.51
NCLP19338 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NCLP19338 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NCLP19338 AC041040.2-201ENST00000622926 2899 ntBASIC18.26■□□□□ 0.51
NCLP19338 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCLP19338 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NCLP19338 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCLP19338 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NCLP19338 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.26■□□□□ 0.51
NCLP19338 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NCLP19338 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCLP19338 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NCLP19338 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCLP19338 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NCLP19338 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.25■□□□□ 0.51
NCLP19338 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC18.25■□□□□ 0.51
NCLP19338 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCLP19338 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCLP19338 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCLP19338 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC18.25■□□□□ 0.51
NCLP19338 KRT8P37-201ENST00000451609 1420 ntBASIC18.25■□□□□ 0.51
NCLP19338 AL031595.1-201ENST00000623969 4709 ntBASIC18.25■□□□□ 0.51
NCLP19338 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
NCLP19338 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC18.25■□□□□ 0.51
NCLP19338 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCLP19338 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NCLP19338 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.25■□□□□ 0.51
NCLP19338 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCLP19338 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.25■□□□□ 0.51
NCLP19338 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NCLP19338 AC005237.2-201ENST00000434368 219 ntBASIC18.25■□□□□ 0.51
NCLP19338 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.25■□□□□ 0.51
NCLP19338 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
NCLP19338 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.25■□□□□ 0.51
NCLP19338 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.25■□□□□ 0.51
NCLP19338 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.25■□□□□ 0.51
NCLP19338 AC008267.7-201ENST00000624570 1194 ntBASIC18.25■□□□□ 0.51
NCLP19338 LINC00628-201ENST00000628516 1289 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms