Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 C18orf15-201ENST00000623680 2534 ntBASIC15.4■□□□□ 0.06
VCLP18206 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
VCLP18206 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VCLP18206 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
VCLP18206 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
VCLP18206 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
VCLP18206 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.4■□□□□ 0.06
VCLP18206 MYCLP2-201ENST00000449268 967 ntBASIC15.4■□□□□ 0.06
VCLP18206 RN7SL399P-201ENST00000471648 279 ntBASIC15.4■□□□□ 0.06
VCLP18206 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.4■□□□□ 0.06
VCLP18206 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.4■□□□□ 0.06
VCLP18206 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
VCLP18206 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VCLP18206 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VCLP18206 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
VCLP18206 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VCLP18206 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
VCLP18206 AC112693.3-201ENST00000624819 1983 ntBASIC15.4■□□□□ 0.06
VCLP18206 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VCLP18206 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.4■□□□□ 0.06
VCLP18206 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
VCLP18206 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VCLP18206 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VCLP18206 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VCLP18206 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.4■□□□□ 0.06
VCLP18206 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.4■□□□□ 0.06
VCLP18206 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VCLP18206 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VCLP18206 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
VCLP18206 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VCLP18206 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.4■□□□□ 0.06
VCLP18206 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.39■□□□□ 0.05
VCLP18206 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VCLP18206 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
VCLP18206 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VCLP18206 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.39■□□□□ 0.05
VCLP18206 AC015656.1-201ENST00000624209 3578 ntBASIC15.39■□□□□ 0.05
VCLP18206 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VCLP18206 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
VCLP18206 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
VCLP18206 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VCLP18206 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VCLP18206 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.39■□□□□ 0.05
VCLP18206 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
VCLP18206 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.39■□□□□ 0.05
VCLP18206 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VCLP18206 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
VCLP18206 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VCLP18206 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.39■□□□□ 0.05
VCLP18206 AC098614.1-201ENST00000368528 745 ntBASIC15.39■□□□□ 0.05
VCLP18206 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
VCLP18206 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.39■□□□□ 0.05
VCLP18206 KRT18P64-201ENST00000434946 1219 ntBASIC15.39■□□□□ 0.05
VCLP18206 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.39■□□□□ 0.05
VCLP18206 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
VCLP18206 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.39■□□□□ 0.05
VCLP18206 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VCLP18206 AC008494.3-201ENST00000606615 944 ntBASIC15.39■□□□□ 0.05
VCLP18206 AC025048.6-201ENST00000634326 1161 ntBASIC15.39■□□□□ 0.05
VCLP18206 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VCLP18206 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
VCLP18206 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.39■□□□□ 0.05
VCLP18206 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VCLP18206 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
VCLP18206 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.39■□□□□ 0.05
VCLP18206 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
VCLP18206 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
VCLP18206 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VCLP18206 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
VCLP18206 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
VCLP18206 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.39■□□□□ 0.05
VCLP18206 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VCLP18206 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VCLP18206 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VCLP18206 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.38■□□□□ 0.05
VCLP18206 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VCLP18206 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.38■□□□□ 0.05
VCLP18206 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VCLP18206 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
VCLP18206 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VCLP18206 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
VCLP18206 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
VCLP18206 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
VCLP18206 PCDHA3-202ENST00000532566 4594 ntBASIC15.38■□□□□ 0.05
VCLP18206 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.38■□□□□ 0.05
VCLP18206 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
VCLP18206 AP006294.1-201ENST00000415407 339 ntBASIC15.38■□□□□ 0.05
VCLP18206 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.38■□□□□ 0.05
VCLP18206 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.38■□□□□ 0.05
VCLP18206 FAM86LP-201ENST00000478302 853 ntBASIC15.38■□□□□ 0.05
VCLP18206 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.38■□□□□ 0.05
VCLP18206 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.38■□□□□ 0.05
VCLP18206 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.38■□□□□ 0.05
VCLP18206 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.38■□□□□ 0.05
VCLP18206 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.38■□□□□ 0.05
VCLP18206 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
VCLP18206 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.38■□□□□ 0.05
VCLP18206 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
VCLP18206 AC105233.6-201ENST00000642093 218 ntBASIC15.38■□□□□ 0.05
VCLP18206 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms