Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.76□□□□□ -0.21
PPP3CBP16298 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.76□□□□□ -0.21
PPP3CBP16298 KRT8P22-201ENST00000562317 1415 ntBASIC13.76□□□□□ -0.21
PPP3CBP16298 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 AC074338.1-201ENST00000416825 156 ntBASIC13.76□□□□□ -0.21
PPP3CBP16298 KRT43P-201ENST00000434019 910 ntBASIC13.76□□□□□ -0.21
PPP3CBP16298 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.76□□□□□ -0.21
PPP3CBP16298 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.76□□□□□ -0.21
PPP3CBP16298 KRT17P8-201ENST00000540749 863 ntBASIC13.76□□□□□ -0.21
PPP3CBP16298 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.76□□□□□ -0.21
PPP3CBP16298 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PPP3CBP16298 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.76□□□□□ -0.21
PPP3CBP16298 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.76□□□□□ -0.21
PPP3CBP16298 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PPP3CBP16298 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.76□□□□□ -0.21
PPP3CBP16298 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.76□□□□□ -0.21
PPP3CBP16298 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PPP3CBP16298 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PPP3CBP16298 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PPP3CBP16298 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.76□□□□□ -0.21
PPP3CBP16298 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PPP3CBP16298 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.75□□□□□ -0.21
PPP3CBP16298 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PPP3CBP16298 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.75□□□□□ -0.21
PPP3CBP16298 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.75□□□□□ -0.21
PPP3CBP16298 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.75□□□□□ -0.21
PPP3CBP16298 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.75□□□□□ -0.21
PPP3CBP16298 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.75□□□□□ -0.21
PPP3CBP16298 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.75□□□□□ -0.21
PPP3CBP16298 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PPP3CBP16298 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.75□□□□□ -0.21
PPP3CBP16298 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.75□□□□□ -0.21
PPP3CBP16298 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.75□□□□□ -0.21
PPP3CBP16298 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.75□□□□□ -0.21
PPP3CBP16298 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.75□□□□□ -0.21
PPP3CBP16298 HNRNPUP1-201ENST00000554987 333 ntBASIC13.75□□□□□ -0.21
PPP3CBP16298 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.75□□□□□ -0.21
PPP3CBP16298 BRI3BPP1-201ENST00000594224 787 ntBASIC13.75□□□□□ -0.21
PPP3CBP16298 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.75□□□□□ -0.21
PPP3CBP16298 MIR6805-201ENST00000615055 62 ntBASIC13.75□□□□□ -0.21
PPP3CBP16298 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.75□□□□□ -0.21
PPP3CBP16298 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
PPP3CBP16298 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PPP3CBP16298 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PPP3CBP16298 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PPP3CBP16298 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
PPP3CBP16298 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PPP3CBP16298 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PPP3CBP16298 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PPP3CBP16298 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PPP3CBP16298 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PPP3CBP16298 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PPP3CBP16298 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PPP3CBP16298 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.74□□□□□ -0.21
PPP3CBP16298 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PPP3CBP16298 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PPP3CBP16298 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PPP3CBP16298 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PPP3CBP16298 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PPP3CBP16298 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms