Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LAMP1P11279 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LAMP1P11279 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LAMP1P11279 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LAMP1P11279 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
LAMP1P11279 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LAMP1P11279 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LAMP1P11279 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
LAMP1P11279 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
LAMP1P11279 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
LAMP1P11279 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LAMP1P11279 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LAMP1P11279 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
LAMP1P11279 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
LAMP1P11279 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.45□□□□□ -0.1
LAMP1P11279 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.45□□□□□ -0.1
LAMP1P11279 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.45□□□□□ -0.1
LAMP1P11279 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
LAMP1P11279 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.45□□□□□ -0.1
LAMP1P11279 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.45□□□□□ -0.1
LAMP1P11279 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.45□□□□□ -0.1
LAMP1P11279 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 AC113367.3-201ENST00000508316 1912 ntBASIC14.45□□□□□ -0.1
LAMP1P11279 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.45□□□□□ -0.1
LAMP1P11279 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.45□□□□□ -0.1
LAMP1P11279 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
LAMP1P11279 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.45□□□□□ -0.1
LAMP1P11279 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.45□□□□□ -0.1
LAMP1P11279 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.45□□□□□ -0.1
LAMP1P11279 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.45□□□□□ -0.1
LAMP1P11279 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.45□□□□□ -0.1
LAMP1P11279 DRD5P1-201ENST00000456605 1438 ntBASIC14.45□□□□□ -0.1
LAMP1P11279 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.45□□□□□ -0.1
LAMP1P11279 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.45□□□□□ -0.1
LAMP1P11279 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.45□□□□□ -0.1
LAMP1P11279 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.45□□□□□ -0.1
LAMP1P11279 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 AC004790.1-201ENST00000612686 536 ntBASIC14.45□□□□□ -0.1
LAMP1P11279 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
LAMP1P11279 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.45□□□□□ -0.1
LAMP1P11279 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.45□□□□□ -0.1
LAMP1P11279 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.45□□□□□ -0.1
LAMP1P11279 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LAMP1P11279 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.45□□□□□ -0.1
LAMP1P11279 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LAMP1P11279 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAMP1P11279 MIR600HG-201ENST00000449175 5984 ntBASIC14.44□□□□□ -0.1
LAMP1P11279 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LAMP1P11279 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAMP1P11279 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAMP1P11279 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.44□□□□□ -0.1
LAMP1P11279 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.44□□□□□ -0.1
LAMP1P11279 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAMP1P11279 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LAMP1P11279 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAMP1P11279 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAMP1P11279 OR2I1P-209ENST00000641730 5365 ntBASIC14.44□□□□□ -0.1
LAMP1P11279 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAMP1P11279 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAMP1P11279 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.44□□□□□ -0.1
LAMP1P11279 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.44□□□□□ -0.1
LAMP1P11279 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAMP1P11279 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.44□□□□□ -0.1
LAMP1P11279 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.44□□□□□ -0.1
LAMP1P11279 FAM86LP-201ENST00000478302 853 ntBASIC14.44□□□□□ -0.1
LAMP1P11279 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAMP1P11279 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.44□□□□□ -0.1
LAMP1P11279 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.44□□□□□ -0.1
LAMP1P11279 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.44□□□□□ -0.1
LAMP1P11279 AC093512.1-201ENST00000617969 520 ntBASIC14.44□□□□□ -0.1
LAMP1P11279 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LAMP1P11279 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.44□□□□□ -0.1
LAMP1P11279 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.44□□□□□ -0.1
LAMP1P11279 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
LAMP1P11279 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAMP1P11279 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.44□□□□□ -0.1
LAMP1P11279 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LAMP1P11279 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.44□□□□□ -0.1
LAMP1P11279 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LAMP1P11279 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LAMP1P11279 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms