Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.78■□□□□ 0.12
CD48P09326 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CD48P09326 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.78■□□□□ 0.12
CD48P09326 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD48P09326 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
CD48P09326 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD48P09326 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD48P09326 KRT8P22-201ENST00000562317 1415 ntBASIC15.77■□□□□ 0.12
CD48P09326 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD48P09326 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.77■□□□□ 0.12
CD48P09326 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD48P09326 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD48P09326 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CD48P09326 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CD48P09326 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD48P09326 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD48P09326 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CD48P09326 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
CD48P09326 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD48P09326 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD48P09326 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CD48P09326 AL442647.2-201ENST00000429864 857 ntBASIC15.77■□□□□ 0.12
CD48P09326 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.77■□□□□ 0.12
CD48P09326 FAM207CP-201ENST00000443486 507 ntBASIC15.77■□□□□ 0.12
CD48P09326 MYCLP2-201ENST00000449268 967 ntBASIC15.77■□□□□ 0.12
CD48P09326 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.77■□□□□ 0.12
CD48P09326 AP001582.1-201ENST00000525856 295 ntBASIC15.77■□□□□ 0.12
CD48P09326 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.77■□□□□ 0.12
CD48P09326 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.77■□□□□ 0.12
CD48P09326 WASH4P-201ENST00000564273 1246 ntBASIC15.77■□□□□ 0.12
CD48P09326 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.77■□□□□ 0.12
CD48P09326 CTBP2P3-201ENST00000585629 1255 ntBASIC15.77■□□□□ 0.12
CD48P09326 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CD48P09326 AL355385.1-201ENST00000606123 409 ntBASIC15.77■□□□□ 0.12
CD48P09326 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
CD48P09326 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.77■□□□□ 0.11
CD48P09326 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD48P09326 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD48P09326 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD48P09326 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.77■□□□□ 0.11
CD48P09326 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CD48P09326 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD48P09326 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.76■□□□□ 0.11
CD48P09326 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.76■□□□□ 0.11
CD48P09326 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CD48P09326 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CD48P09326 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CD48P09326 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CD48P09326 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.76■□□□□ 0.11
CD48P09326 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CD48P09326 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CD48P09326 AC015656.1-201ENST00000624209 3578 ntBASIC15.76■□□□□ 0.11
CD48P09326 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 RNU1-114P-201ENST00000365297 166 ntBASIC15.76■□□□□ 0.11
CD48P09326 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.76■□□□□ 0.11
CD48P09326 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.76■□□□□ 0.11
CD48P09326 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.76■□□□□ 0.11
CD48P09326 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.76■□□□□ 0.11
CD48P09326 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.76■□□□□ 0.11
CD48P09326 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.76■□□□□ 0.11
CD48P09326 AC008494.3-201ENST00000606615 944 ntBASIC15.76■□□□□ 0.11
CD48P09326 BX539320.1-201ENST00000623759 877 ntBASIC15.76■□□□□ 0.11
CD48P09326 PRSS30P-206ENST00000641773 873 ntBASIC15.76■□□□□ 0.11
CD48P09326 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CD48P09326 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.76■□□□□ 0.11
CD48P09326 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
CD48P09326 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.76■□□□□ 0.11
CD48P09326 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.76■□□□□ 0.11
CD48P09326 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CD48P09326 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD48P09326 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms