Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA2P01906 AC025048.3-201ENST00000590609 569 ntBASIC13.77□□□□□ -0.21
HLA-DQA2P01906 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.77□□□□□ -0.21
HLA-DQA2P01906 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.77□□□□□ -0.21
HLA-DQA2P01906 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA2P01906 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA2P01906 AC005702.4-201ENST00000618393 416 ntBASIC13.77□□□□□ -0.21
HLA-DQA2P01906 SPDYE12P-201ENST00000618416 771 ntBASIC13.77□□□□□ -0.21
HLA-DQA2P01906 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DQA2P01906 Z92544.3-201ENST00000624747 417 ntBASIC13.77□□□□□ -0.21
HLA-DQA2P01906 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA2P01906 AF228730.6-201ENST00000641497 218 ntBASIC13.77□□□□□ -0.21
HLA-DQA2P01906 AC084121.3-201ENST00000641716 218 ntBASIC13.77□□□□□ -0.21
HLA-DQA2P01906 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA2P01906 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA2P01906 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA2P01906 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA2P01906 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
HLA-DQA2P01906 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA2P01906 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA2P01906 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
HLA-DQA2P01906 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DQA2P01906 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 DNAJB3-202ENST00000449667 1266 ntBASIC13.76□□□□□ -0.21
HLA-DQA2P01906 HLA-V-204ENST00000476601 1289 ntBASIC13.76□□□□□ -0.21
HLA-DQA2P01906 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 AC109322.1-201ENST00000524499 1264 ntBASIC13.76□□□□□ -0.21
HLA-DQA2P01906 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 AC025678.2-201ENST00000562061 970 ntBASIC13.76□□□□□ -0.21
HLA-DQA2P01906 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 AC007292.2-201ENST00000593524 1812 ntBASIC13.76□□□□□ -0.21
HLA-DQA2P01906 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DQA2P01906 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
HLA-DQA2P01906 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HLA-DQA2P01906 AC092053.3-201ENST00000641308 4975 ntBASIC13.75□□□□□ -0.21
HLA-DQA2P01906 FAM45BP-202ENST00000592932 1624 ntBASIC13.75□□□□□ -0.21
HLA-DQA2P01906 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DQA2P01906 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.75□□□□□ -0.21
HLA-DQA2P01906 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DQA2P01906 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HLA-DQA2P01906 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.75□□□□□ -0.21
HLA-DQA2P01906 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DQA2P01906 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
HLA-DQA2P01906 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HLA-DQA2P01906 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.75□□□□□ -0.21
HLA-DQA2P01906 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
HLA-DQA2P01906 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DQA2P01906 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms