Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.11□□□□□ -0.47
IFNA1P01562 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 AC084364.1-201ENST00000551967 1556 ntBASIC12.11□□□□□ -0.47
IFNA1P01562 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.11□□□□□ -0.47
IFNA1P01562 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
IFNA1P01562 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
IFNA1P01562 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.11□□□□□ -0.47
IFNA1P01562 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
IFNA1P01562 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.11□□□□□ -0.47
IFNA1P01562 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.11□□□□□ -0.47
IFNA1P01562 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.11□□□□□ -0.47
IFNA1P01562 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 AC106795.1-205ENST00000512851 1056 ntBASIC12.11□□□□□ -0.47
IFNA1P01562 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.11□□□□□ -0.47
IFNA1P01562 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.11□□□□□ -0.47
IFNA1P01562 AL031432.2-201ENST00000566714 459 ntBASIC12.11□□□□□ -0.47
IFNA1P01562 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 AL928711.1-201ENST00000570165 459 ntBASIC12.11□□□□□ -0.47
IFNA1P01562 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
IFNA1P01562 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.11□□□□□ -0.47
IFNA1P01562 AL645728.2-201ENST00000641974 660 ntBASIC12.11□□□□□ -0.47
IFNA1P01562 AC011481.3-201ENST00000623895 5594 ntBASIC12.11□□□□□ -0.47
IFNA1P01562 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.11□□□□□ -0.47
IFNA1P01562 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
IFNA1P01562 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
IFNA1P01562 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.11□□□□□ -0.47
IFNA1P01562 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.11□□□□□ -0.47
IFNA1P01562 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
IFNA1P01562 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
IFNA1P01562 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
IFNA1P01562 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
IFNA1P01562 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC12.1□□□□□ -0.47
IFNA1P01562 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
IFNA1P01562 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.1□□□□□ -0.47
IFNA1P01562 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
IFNA1P01562 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
IFNA1P01562 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.1□□□□□ -0.47
IFNA1P01562 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.1□□□□□ -0.47
IFNA1P01562 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
IFNA1P01562 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
IFNA1P01562 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
IFNA1P01562 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.1□□□□□ -0.47
IFNA1P01562 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
IFNA1P01562 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
IFNA1P01562 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
IFNA1P01562 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
IFNA1P01562 AC016734.2-201ENST00000624325 1377 ntBASIC12.1□□□□□ -0.47
IFNA1P01562 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.1□□□□□ -0.47
IFNA1P01562 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
IFNA1P01562 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
IFNA1P01562 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
IFNA1P01562 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.1□□□□□ -0.47
IFNA1P01562 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
IFNA1P01562 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms