Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 POU5F1P6-201ENST00000466990 990 ntBASIC12.85□□□□□ -0.35
ABCA1O95477 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.85□□□□□ -0.35
ABCA1O95477 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.85□□□□□ -0.35
ABCA1O95477 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.85□□□□□ -0.35
ABCA1O95477 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA1O95477 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA1O95477 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
ABCA1O95477 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA1O95477 AL365203.3-201ENST00000609742 2057 ntBASIC12.84□□□□□ -0.35
ABCA1O95477 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ABCA1O95477 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.84□□□□□ -0.35
ABCA1O95477 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ABCA1O95477 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ABCA1O95477 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.84□□□□□ -0.35
ABCA1O95477 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.84□□□□□ -0.35
ABCA1O95477 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.84□□□□□ -0.35
ABCA1O95477 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC12.84□□□□□ -0.35
ABCA1O95477 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
ABCA1O95477 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ABCA1O95477 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.84□□□□□ -0.35
ABCA1O95477 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ABCA1O95477 FTLP1-201ENST00000449155 526 ntBASIC12.84□□□□□ -0.35
ABCA1O95477 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.84□□□□□ -0.35
ABCA1O95477 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.84□□□□□ -0.35
ABCA1O95477 MIR4706-201ENST00000582134 82 ntBASIC12.84□□□□□ -0.35
ABCA1O95477 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.84□□□□□ -0.35
ABCA1O95477 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.84□□□□□ -0.35
ABCA1O95477 MIR6727-201ENST00000620702 65 ntBASIC12.84□□□□□ -0.35
ABCA1O95477 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ABCA1O95477 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ABCA1O95477 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
ABCA1O95477 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
ABCA1O95477 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.84□□□□□ -0.35
ABCA1O95477 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.84□□□□□ -0.35
ABCA1O95477 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 CICP13-201ENST00000422015 2789 ntBASIC12.84□□□□□ -0.35
ABCA1O95477 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.84□□□□□ -0.35
ABCA1O95477 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ABCA1O95477 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ABCA1O95477 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA1O95477 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
ABCA1O95477 AL603832.2-201ENST00000566195 2125 ntBASIC12.84□□□□□ -0.35
ABCA1O95477 AHCYP2-201ENST00000430630 1300 ntBASIC12.84□□□□□ -0.35
ABCA1O95477 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
ABCA1O95477 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ABCA1O95477 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.83□□□□□ -0.35
ABCA1O95477 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
ABCA1O95477 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
ABCA1O95477 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.83□□□□□ -0.35
ABCA1O95477 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
ABCA1O95477 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
ABCA1O95477 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.83□□□□□ -0.35
ABCA1O95477 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.83□□□□□ -0.35
ABCA1O95477 HSPB1P2-201ENST00000448722 546 ntBASIC12.83□□□□□ -0.35
ABCA1O95477 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.35
ABCA1O95477 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.35
ABCA1O95477 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.83□□□□□ -0.35
ABCA1O95477 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.83□□□□□ -0.35
ABCA1O95477 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
ABCA1O95477 AL450472.2-201ENST00000603663 1156 ntBASIC12.83□□□□□ -0.35
ABCA1O95477 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
ABCA1O95477 AC015818.8-201ENST00000587907 1519 ntBASIC12.83□□□□□ -0.35
ABCA1O95477 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
ABCA1O95477 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
ABCA1O95477 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.83□□□□□ -0.36
ABCA1O95477 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ABCA1O95477 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.83□□□□□ -0.36
ABCA1O95477 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.83□□□□□ -0.36
ABCA1O95477 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.83□□□□□ -0.36
ABCA1O95477 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
ABCA1O95477 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms