Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTNSO60931 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTNSO60931 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTNSO60931 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTNSO60931 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTNSO60931 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTNSO60931 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CTNSO60931 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTNSO60931 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.28□□□□□ -0.12
CTNSO60931 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTNSO60931 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CTNSO60931 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTNSO60931 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.28□□□□□ -0.12
CTNSO60931 TMEM14DP-201ENST00000422205 345 ntBASIC14.28□□□□□ -0.12
CTNSO60931 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTNSO60931 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTNSO60931 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.28□□□□□ -0.12
CTNSO60931 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.28□□□□□ -0.12
CTNSO60931 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.28□□□□□ -0.12
CTNSO60931 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.28□□□□□ -0.12
CTNSO60931 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.28□□□□□ -0.12
CTNSO60931 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.28□□□□□ -0.12
CTNSO60931 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.28□□□□□ -0.12
CTNSO60931 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.28□□□□□ -0.12
CTNSO60931 C8orf49-201ENST00000525043 1968 ntBASIC14.28□□□□□ -0.12
CTNSO60931 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.28□□□□□ -0.12
CTNSO60931 AC106886.1-201ENST00000568660 600 ntBASIC14.28□□□□□ -0.12
CTNSO60931 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTNSO60931 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CTNSO60931 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.28□□□□□ -0.12
CTNSO60931 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.28□□□□□ -0.12
CTNSO60931 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTNSO60931 AC145423.3-201ENST00000615987 467 ntBASIC14.28□□□□□ -0.12
CTNSO60931 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.28□□□□□ -0.12
CTNSO60931 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTNSO60931 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CTNSO60931 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTNSO60931 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.28□□□□□ -0.12
CTNSO60931 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CTNSO60931 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTNSO60931 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CTNSO60931 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTNSO60931 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.27□□□□□ -0.12
CTNSO60931 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CTNSO60931 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CTNSO60931 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CTNSO60931 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTNSO60931 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.27□□□□□ -0.12
CTNSO60931 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CTNSO60931 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.27□□□□□ -0.12
CTNSO60931 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTNSO60931 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.27□□□□□ -0.12
CTNSO60931 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.27□□□□□ -0.12
CTNSO60931 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTNSO60931 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CTNSO60931 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.27□□□□□ -0.12
CTNSO60931 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTNSO60931 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTNSO60931 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CTNSO60931 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.27□□□□□ -0.12
CTNSO60931 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
CTNSO60931 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CTNSO60931 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.27□□□□□ -0.12
CTNSO60931 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CTNSO60931 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CTNSO60931 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.27□□□□□ -0.13
CTNSO60931 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
CTNSO60931 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTNSO60931 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CTNSO60931 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTNSO60931 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CTNSO60931 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CTNSO60931 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.27□□□□□ -0.13
CTNSO60931 BCRP2-202ENST00000447763 634 ntBASIC14.27□□□□□ -0.13
CTNSO60931 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CTNSO60931 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.27□□□□□ -0.13
CTNSO60931 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CTNSO60931 BCRP6-201ENST00000510112 632 ntBASIC14.27□□□□□ -0.13
CTNSO60931 BCRP7-201ENST00000511549 544 ntBASIC14.27□□□□□ -0.13
CTNSO60931 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.27□□□□□ -0.13
CTNSO60931 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.27□□□□□ -0.13
CTNSO60931 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CTNSO60931 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
CTNSO60931 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.27□□□□□ -0.13
CTNSO60931 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.27□□□□□ -0.13
CTNSO60931 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.27□□□□□ -0.13
CTNSO60931 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
CTNSO60931 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.27□□□□□ -0.13
CTNSO60931 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CTNSO60931 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CTNSO60931 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.27□□□□□ -0.13
CTNSO60931 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CTNSO60931 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.27□□□□□ -0.13
CTNSO60931 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
CTNSO60931 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CTNSO60931 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CTNSO60931 AL137783.1-201ENST00000623494 1896 ntBASIC14.27□□□□□ -0.13
CTNSO60931 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
CTNSO60931 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.26□□□□□ -0.13
CTNSO60931 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms