Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
HCN1O60741 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.33□□□□□ -0.12
HCN1O60741 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.33□□□□□ -0.12
HCN1O60741 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCN1O60741 RPL13P2-201ENST00000440687 659 ntBASIC14.33□□□□□ -0.12
HCN1O60741 AC244107.1-201ENST00000442033 332 ntBASIC14.33□□□□□ -0.12
HCN1O60741 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.33□□□□□ -0.12
HCN1O60741 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCN1O60741 AC104596.2-201ENST00000512793 793 ntBASIC14.33□□□□□ -0.12
HCN1O60741 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.33□□□□□ -0.12
HCN1O60741 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.33□□□□□ -0.12
HCN1O60741 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.33□□□□□ -0.12
HCN1O60741 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.33□□□□□ -0.12
HCN1O60741 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.33□□□□□ -0.12
HCN1O60741 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.33□□□□□ -0.12
HCN1O60741 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.33□□□□□ -0.12
HCN1O60741 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.33□□□□□ -0.12
HCN1O60741 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.33□□□□□ -0.12
HCN1O60741 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCN1O60741 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.33□□□□□ -0.12
HCN1O60741 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCN1O60741 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HCN1O60741 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCN1O60741 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HCN1O60741 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
HCN1O60741 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HCN1O60741 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCN1O60741 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCN1O60741 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.33□□□□□ -0.12
HCN1O60741 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCN1O60741 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCN1O60741 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HCN1O60741 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HCN1O60741 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HCN1O60741 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCN1O60741 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
HCN1O60741 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCN1O60741 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.32□□□□□ -0.12
HCN1O60741 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HCN1O60741 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.32□□□□□ -0.12
HCN1O60741 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCN1O60741 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.32□□□□□ -0.12
HCN1O60741 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HCN1O60741 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCN1O60741 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HCN1O60741 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.32□□□□□ -0.12
HCN1O60741 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HCN1O60741 GK-202ENST00000378941 458 ntTSL 3 BASIC14.32□□□□□ -0.12
HCN1O60741 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCN1O60741 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
HCN1O60741 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HCN1O60741 TARDBPP1-201ENST00000442013 1203 ntBASIC14.32□□□□□ -0.12
HCN1O60741 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.32□□□□□ -0.12
HCN1O60741 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.32□□□□□ -0.12
HCN1O60741 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.32□□□□□ -0.12
HCN1O60741 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HCN1O60741 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.32□□□□□ -0.12
HCN1O60741 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.32□□□□□ -0.12
HCN1O60741 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.32□□□□□ -0.12
HCN1O60741 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.32□□□□□ -0.12
HCN1O60741 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.32□□□□□ -0.12
HCN1O60741 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.32□□□□□ -0.12
HCN1O60741 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.32□□□□□ -0.12
HCN1O60741 TMEM261P1-201ENST00000604899 340 ntBASIC14.32□□□□□ -0.12
HCN1O60741 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.32□□□□□ -0.12
HCN1O60741 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCN1O60741 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.32□□□□□ -0.12
HCN1O60741 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCN1O60741 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
HCN1O60741 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HCN1O60741 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.32□□□□□ -0.12
HCN1O60741 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HCN1O60741 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCN1O60741 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCN1O60741 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HCN1O60741 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCN1O60741 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HCN1O60741 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.32□□□□□ -0.12
HCN1O60741 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.32□□□□□ -0.12
HCN1O60741 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HCN1O60741 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.31□□□□□ -0.12
HCN1O60741 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HCN1O60741 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.31□□□□□ -0.12
HCN1O60741 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HCN1O60741 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HCN1O60741 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.31□□□□□ -0.12
HCN1O60741 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.31□□□□□ -0.12
HCN1O60741 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.31□□□□□ -0.12
HCN1O60741 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HCN1O60741 AC232323.1-201ENST00000540724 2099 ntBASIC14.31□□□□□ -0.12
HCN1O60741 REXO1L5P-201ENST00000622260 2098 ntBASIC14.31□□□□□ -0.12
HCN1O60741 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HCN1O60741 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HCN1O60741 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HCN1O60741 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.31□□□□□ -0.12
HCN1O60741 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HCN1O60741 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HCN1O60741 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HCN1O60741 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HCN1O60741 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms