Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
DUX1O43812 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.53□□□□□ -0.08
DUX1O43812 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX1O43812 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX1O43812 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX1O43812 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX1O43812 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX1O43812 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DUX1O43812 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
DUX1O43812 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX1O43812 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DUX1O43812 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.52□□□□□ -0.08
DUX1O43812 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX1O43812 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX1O43812 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.52□□□□□ -0.08
DUX1O43812 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.52□□□□□ -0.08
DUX1O43812 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX1O43812 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX1O43812 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX1O43812 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
DUX1O43812 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.52□□□□□ -0.08
DUX1O43812 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX1O43812 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX1O43812 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DUX1O43812 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DUX1O43812 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX1O43812 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DUX1O43812 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.52□□□□□ -0.09
DUX1O43812 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.52□□□□□ -0.09
DUX1O43812 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DUX1O43812 SCARNA20.5-201ENST00000516991 142 ntBASIC14.52□□□□□ -0.09
DUX1O43812 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.52□□□□□ -0.09
DUX1O43812 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.52□□□□□ -0.09
DUX1O43812 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.52□□□□□ -0.09
DUX1O43812 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX1O43812 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.52□□□□□ -0.09
DUX1O43812 AP001002.3-201ENST00000623482 206 ntBASIC14.52□□□□□ -0.09
DUX1O43812 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DUX1O43812 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
DUX1O43812 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
DUX1O43812 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
DUX1O43812 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX1O43812 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DUX1O43812 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.52□□□□□ -0.09
DUX1O43812 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX1O43812 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.52□□□□□ -0.09
DUX1O43812 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.51□□□□□ -0.09
DUX1O43812 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
DUX1O43812 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
DUX1O43812 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.51□□□□□ -0.09
DUX1O43812 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.51□□□□□ -0.09
DUX1O43812 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.51□□□□□ -0.09
DUX1O43812 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
DUX1O43812 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
DUX1O43812 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.51□□□□□ -0.09
DUX1O43812 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.51□□□□□ -0.09
DUX1O43812 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.51□□□□□ -0.09
DUX1O43812 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.51□□□□□ -0.09
DUX1O43812 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.51□□□□□ -0.09
DUX1O43812 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.51□□□□□ -0.09
DUX1O43812 CHMP1AP1-201ENST00000445563 662 ntBASIC14.51□□□□□ -0.09
DUX1O43812 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.51□□□□□ -0.09
DUX1O43812 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.51□□□□□ -0.09
DUX1O43812 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.51□□□□□ -0.09
DUX1O43812 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.51□□□□□ -0.09
DUX1O43812 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.51□□□□□ -0.09
DUX1O43812 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.51□□□□□ -0.09
DUX1O43812 AC007663.3-201ENST00000609632 465 ntBASIC14.51□□□□□ -0.09
DUX1O43812 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.51□□□□□ -0.09
DUX1O43812 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.51□□□□□ -0.09
DUX1O43812 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
DUX1O43812 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
DUX1O43812 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
DUX1O43812 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
DUX1O43812 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.51□□□□□ -0.09
DUX1O43812 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX1O43812 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
DUX1O43812 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
DUX1O43812 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
DUX1O43812 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms