Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 FGD5P1-202ENST00000614866 2498 ntBASIC13.59□□□□□ -0.23
TRAF3IP2O43734 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.58□□□□□ -0.23
TRAF3IP2O43734 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
TRAF3IP2O43734 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
TRAF3IP2O43734 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 RNU1-114P-201ENST00000365297 166 ntBASIC13.58□□□□□ -0.24
TRAF3IP2O43734 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 DGCR5-201ENST00000399539 862 ntBASIC13.58□□□□□ -0.24
TRAF3IP2O43734 AL139094.1-201ENST00000405549 1188 ntBASIC13.58□□□□□ -0.24
TRAF3IP2O43734 AL162726.2-201ENST00000438986 1017 ntBASIC13.58□□□□□ -0.24
TRAF3IP2O43734 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAF3IP2O43734 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 AL161772.1-201ENST00000610494 4412 ntBASIC13.57□□□□□ -0.24
TRAF3IP2O43734 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 CICP23-201ENST00000605013 2741 ntBASIC13.57□□□□□ -0.24
TRAF3IP2O43734 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAF3IP2O43734 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms