Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.49■□□□□ 0.07
RIPK2O43353 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.49■□□□□ 0.07
RIPK2O43353 RPL13P2-201ENST00000440687 659 ntBASIC15.49■□□□□ 0.07
RIPK2O43353 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.49■□□□□ 0.07
RIPK2O43353 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.49■□□□□ 0.07
RIPK2O43353 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
RIPK2O43353 KRT18P43-201ENST00000469825 1281 ntBASIC15.49■□□□□ 0.07
RIPK2O43353 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.49■□□□□ 0.07
RIPK2O43353 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.49■□□□□ 0.07
RIPK2O43353 SAMD11P1-201ENST00000571429 661 ntBASIC15.49■□□□□ 0.07
RIPK2O43353 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.49■□□□□ 0.07
RIPK2O43353 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RIPK2O43353 AC025048.3-201ENST00000590609 569 ntBASIC15.49■□□□□ 0.07
RIPK2O43353 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
RIPK2O43353 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
RIPK2O43353 AC007967.4-201ENST00000614700 386 ntBASIC15.49■□□□□ 0.07
RIPK2O43353 AC005702.4-201ENST00000618393 416 ntBASIC15.49■□□□□ 0.07
RIPK2O43353 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.49■□□□□ 0.07
RIPK2O43353 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RIPK2O43353 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 SBF1P1-201ENST00000444527 5631 ntBASIC15.49■□□□□ 0.07
RIPK2O43353 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RIPK2O43353 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.49■□□□□ 0.07
RIPK2O43353 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 AC016397.2-201ENST00000624848 1985 ntBASIC15.49■□□□□ 0.07
RIPK2O43353 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.49■□□□□ 0.07
RIPK2O43353 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RIPK2O43353 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.49■□□□□ 0.07
RIPK2O43353 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
RIPK2O43353 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.48■□□□□ 0.07
RIPK2O43353 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.48■□□□□ 0.07
RIPK2O43353 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.48■□□□□ 0.07
RIPK2O43353 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.48■□□□□ 0.07
RIPK2O43353 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RIPK2O43353 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RIPK2O43353 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RIPK2O43353 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.48■□□□□ 0.07
RIPK2O43353 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RIPK2O43353 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.48■□□□□ 0.07
RIPK2O43353 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RIPK2O43353 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.48■□□□□ 0.07
RIPK2O43353 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.48■□□□□ 0.07
RIPK2O43353 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.48■□□□□ 0.07
RIPK2O43353 SLC25A1P1-201ENST00000528351 927 ntBASIC15.48■□□□□ 0.07
RIPK2O43353 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.48■□□□□ 0.07
RIPK2O43353 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.48■□□□□ 0.07
RIPK2O43353 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.48■□□□□ 0.07
RIPK2O43353 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.48■□□□□ 0.07
RIPK2O43353 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
RIPK2O43353 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.48■□□□□ 0.07
RIPK2O43353 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.48■□□□□ 0.07
RIPK2O43353 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RIPK2O43353 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 AL035456.1-201ENST00000456064 1369 ntBASIC15.48■□□□□ 0.07
RIPK2O43353 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.48■□□□□ 0.07
RIPK2O43353 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.48■□□□□ 0.07
RIPK2O43353 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RIPK2O43353 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RIPK2O43353 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RIPK2O43353 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RIPK2O43353 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RIPK2O43353 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RIPK2O43353 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RIPK2O43353 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RIPK2O43353 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RIPK2O43353 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RIPK2O43353 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RIPK2O43353 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.47■□□□□ 0.07
RIPK2O43353 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RIPK2O43353 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.47■□□□□ 0.07
RIPK2O43353 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms