Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MSH5O43196 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
MSH5O43196 NUP43-203ENST00000367404 1089 ntTSL 2 BASIC21.57■■□□□ 1.04
MSH5O43196 AL365214.1-201ENST00000404237 997 ntBASIC21.57■■□□□ 1.04
MSH5O43196 TSSK5P-201ENST00000423978 907 ntBASIC21.57■■□□□ 1.04
MSH5O43196 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC21.57■■□□□ 1.04
MSH5O43196 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC21.57■■□□□ 1.04
MSH5O43196 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC21.57■■□□□ 1.04
MSH5O43196 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MSH5O43196 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MSH5O43196 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC21.57■■□□□ 1.04
MSH5O43196 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
MSH5O43196 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
MSH5O43196 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MSH5O43196 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.57■■□□□ 1.04
MSH5O43196 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC21.57■■□□□ 1.04
MSH5O43196 ARL16-202ENST00000570561 768 ntTSL 2 BASIC21.57■■□□□ 1.04
MSH5O43196 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
MSH5O43196 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.57■■□□□ 1.04
MSH5O43196 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC21.57■■□□□ 1.04
MSH5O43196 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
MSH5O43196 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MSH5O43196 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MSH5O43196 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.57■■□□□ 1.04
MSH5O43196 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MSH5O43196 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MSH5O43196 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MSH5O43196 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MSH5O43196 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MSH5O43196 FYTTD1-203ENST00000415708 1342 ntTSL 2 BASIC21.56■■□□□ 1.04
MSH5O43196 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MSH5O43196 CASK-202ENST00000378158 3848 ntTSL 5 BASIC21.56■■□□□ 1.04
MSH5O43196 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MSH5O43196 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
MSH5O43196 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
MSH5O43196 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MSH5O43196 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MSH5O43196 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MSH5O43196 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MSH5O43196 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MSH5O43196 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
MSH5O43196 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC21.56■■□□□ 1.04
MSH5O43196 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MSH5O43196 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
MSH5O43196 TMED6-201ENST00000288025 938 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MSH5O43196 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.56■■□□□ 1.04
MSH5O43196 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC21.56■■□□□ 1.04
MSH5O43196 GCA-203ENST00000429691 824 ntTSL 3 BASIC21.56■■□□□ 1.04
MSH5O43196 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC21.56■■□□□ 1.04
MSH5O43196 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC21.56■■□□□ 1.04
MSH5O43196 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC21.56■■□□□ 1.04
MSH5O43196 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC21.56■■□□□ 1.04
MSH5O43196 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MSH5O43196 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC21.56■■□□□ 1.04
MSH5O43196 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC21.56■■□□□ 1.04
MSH5O43196 AC005412.3-201ENST00000580309 715 ntBASIC21.56■■□□□ 1.04
MSH5O43196 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MSH5O43196 AC005252.1-201ENST00000604518 1063 ntBASIC21.56■■□□□ 1.04
MSH5O43196 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC21.56■■□□□ 1.04
MSH5O43196 AL078595.3-201ENST00000623815 1166 ntBASIC21.56■■□□□ 1.04
MSH5O43196 AC138627.1-204ENST00000641894 765 ntBASIC21.56■■□□□ 1.04
MSH5O43196 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC21.56■■□□□ 1.04
MSH5O43196 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MSH5O43196 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC21.56■■□□□ 1.04
MSH5O43196 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
MSH5O43196 HLA-DQB2-231ENST00000435145 2026 ntBASIC21.56■■□□□ 1.04
MSH5O43196 AC138969.3-201ENST00000546612 1459 ntBASIC21.56■■□□□ 1.04
MSH5O43196 AC138932.2-201ENST00000548268 1459 ntBASIC21.56■■□□□ 1.04
MSH5O43196 AC126755.4-201ENST00000549796 1459 ntBASIC21.56■■□□□ 1.04
MSH5O43196 AC007541.1-201ENST00000570282 1469 ntBASIC21.56■■□□□ 1.04
MSH5O43196 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MSH5O43196 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC21.56■■□□□ 1.04
MSH5O43196 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MSH5O43196 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MSH5O43196 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC21.55■■□□□ 1.04
MSH5O43196 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
MSH5O43196 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSH5O43196 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC21.55■■□□□ 1.04
MSH5O43196 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC21.55■■□□□ 1.04
MSH5O43196 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC21.55■■□□□ 1.04
MSH5O43196 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSH5O43196 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC21.55■■□□□ 1.04
MSH5O43196 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
MSH5O43196 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
MSH5O43196 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC21.55■■□□□ 1.04
MSH5O43196 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSH5O43196 TLE1P1-201ENST00000422965 589 ntBASIC21.55■■□□□ 1.04
MSH5O43196 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.55■■□□□ 1.04
MSH5O43196 AL359839.1-201ENST00000451975 1160 ntBASIC21.55■■□□□ 1.04
MSH5O43196 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MSH5O43196 APTX-220ENST00000476858 1068 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MSH5O43196 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC21.55■■□□□ 1.04
MSH5O43196 AC012339.1-201ENST00000505564 941 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MSH5O43196 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC21.55■■□□□ 1.04
MSH5O43196 UBTFL10-201ENST00000528532 562 ntBASIC21.55■■□□□ 1.04
MSH5O43196 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC21.55■■□□□ 1.04
MSH5O43196 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MSH5O43196 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MSH5O43196 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
MSH5O43196 AMN1-212ENST00000542781 879 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms